ggKbase home page

13_1_20cm_3_scaffold_135_26

Organism: 13_1_20CM_3_Actinobacteria_71_11

partial RP 40 / 55 MC: 3 BSCG 35 / 51 MC: 4 ASCG 12 / 38 MC: 5
Location: comp(26525..27175)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional repressor n=1 Tax=Micromonospora sp. ATCC 39149 RepID=C4RCN5_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 87.3
  • Coverage: 213.0
  • Bit_score: 370
  • Evalue 1.00e-99
  • rbh
Micromonospora carbonacea strain JXNU-1 contig3, whole genome shotgun sequence {ECO:0000313|EMBL:KIR61868.1}; TaxID=47853 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micr UNIPROT
DB: UniProtKB
  • Identity: 86.6
  • Coverage: 216.0
  • Bit_score: 371
  • Evalue 1.10e-99
TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 59.2
  • Coverage: 201.0
  • Bit_score: 245
  • Evalue 1.10e-62

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Micromonospora carbonacea → Micromonospora → Micromonosporales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 651
GTGAGCCCGCGCCGGATCGACCCGAAGCTGACGACGGCCCTGCTGGAGGCAGCGGCGAGCCTGGTGGCCGAGGAGGGCGTCGCCGGCCTCACCACCCGTCGGCTGGCCGCCGCGGTGGGCACCTCGACCACGGCCGTGTACACGCATTTCGGCGGCATGGACAACCTGGTGCGCGCGATGGTGCACGAGGGCTTCGCCCGCCTGCACCGGCGGATGTCCACGGTACGGGCGACCGCCGACGCGGTCGCCGACATCATGGCCCTCGGAACCGCGTACCGGGCCAACGCCCTGGACCATCCGCAGCTCTACCAGGTGATGTTCGGCAGCGCGGCGCTCGGCGGGTTCGCCATCACCGACGGCGACCGGCAACACGGCAGGTACACCCTCCAGCCCCTGGTCGAAGCCGTGGCCCGGGCCACCGAGCAGGGCCGGTTCCGTCCCGGCGACCCGCTGCTGGTCGCCCAGACCATGTGGATCGCCCTGCACGGGCTGGTCAGCCTGGAGCTGGGCGGTTACCTGACCGATCCGTACGACGCGGATGTCTGCTTCGAGGCGCAACTGTGCTCGCTGATGGTCGGCGCCGGCGACGACCACGAGGCGGCCTGCCTGTCCTCGCGCCGCGCCCGGCGGCGCCGGTCCGCGCACGCCTGA
PROTEIN sequence
Length: 217
VSPRRIDPKLTTALLEAAASLVAEEGVAGLTTRRLAAAVGTSTTAVYTHFGGMDNLVRAMVHEGFARLHRRMSTVRATADAVADIMALGTAYRANALDHPQLYQVMFGSAALGGFAITDGDRQHGRYTLQPLVEAVARATEQGRFRPGDPLLVAQTMWIALHGLVSLELGGYLTDPYDADVCFEAQLCSLMVGAGDDHEAACLSSRRARRRRSAHA*