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13_1_20cm_3_scaffold_1405_6

Organism: 13_1_20CM_3_Actinobacteria_71_11

partial RP 40 / 55 MC: 3 BSCG 35 / 51 MC: 4 ASCG 12 / 38 MC: 5
Location: 5934..6443

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ecf subfamily protein n=1 Tax=Actinoplanes friuliensis DSM 7358 RepID=U5VPA8_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 80.8
  • Coverage: 167.0
  • Bit_score: 273
  • Evalue 1.70e-70
RNA polymerase, sigma-24 subunit, ecf subfamily protein {ECO:0000313|EMBL:AGZ38637.1}; TaxID=1246995 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="A UNIPROT
DB: UniProtKB
  • Identity: 80.8
  • Coverage: 167.0
  • Bit_score: 273
  • Evalue 2.40e-70
RNA polymerase, sigma-24 subunit, ecf subfamily protein similarity KEGG
DB: KEGG
  • Identity: 80.8
  • Coverage: 167.0
  • Bit_score: 273
  • Evalue 4.90e-71

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Taxonomy

Actinoplanes friuliensis → Actinoplanes → Micromonosporales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 510
ATGACCGAGGACGCGGAGTTGCTGCGCGTGATGTTCGCGGAGCACGGCGACGCGTTGTACGCCCACGCCCTCCGCCTGGTCAGCGGGGACCGGCAACGGGCCGAGGATCTCGTCCAGGAGACGCTGCTGCGCGCCTGGCGGCATCCCGAAGCGCTCGACCCGGACCGGGGCTCCGTCCGGGCCTGGCTGTTCACGACCGCACGCAACCTGGCGATCGACTCGTGGCGCCGCCGCTCGGTACGCGTCGGTGAGGTGATCACCGACACTCCACCCGAGCCGGTCAGCGACGACGACACCGACCGCACCGTCGAGGCCTGGCTGATCGCCGAGGCGCTCGGCCGGCTGTCCGCGGTCCACCGGGAGGTCCTGGTCGAGTGCTTCTACCAGGGCCGCTCGGTCGCCGAGGCGGCCACCCGGCTCGGCGTACCGGCCGGCACCGTCAAGTCCCGTACGCACTATGCCCTGCGCTCGTTACGACTGGTCCTGGAGGAGATGGGGGTGACGCAATGA
PROTEIN sequence
Length: 170
MTEDAELLRVMFAEHGDALYAHALRLVSGDRQRAEDLVQETLLRAWRHPEALDPDRGSVRAWLFTTARNLAIDSWRRRSVRVGEVITDTPPEPVSDDDTDRTVEAWLIAEALGRLSAVHREVLVECFYQGRSVAEAATRLGVPAGTVKSRTHYALRSLRLVLEEMGVTQ*