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13_1_20cm_3_scaffold_16553_8

Organism: 13_1_20CM_3_Actinobacteria_71_11

partial RP 40 / 55 MC: 3 BSCG 35 / 51 MC: 4 ASCG 12 / 38 MC: 5
Location: comp(5388..5996)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Frankia symbiont subsp. Datisca glomerata RepID=F8B6B4_FRADG similarity UNIREF
DB: UNIREF100
  • Identity: 60.2
  • Coverage: 176.0
  • Bit_score: 220
  • Evalue 1.60e-54
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:AEH08088.1}; TaxID=656024 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia symbiont subsp. Datis UNIPROT
DB: UniProtKB
  • Identity: 60.2
  • Coverage: 176.0
  • Bit_score: 220
  • Evalue 2.20e-54
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 60.2
  • Coverage: 176.0
  • Bit_score: 220
  • Evalue 4.50e-55

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Taxonomy

Frankia symbiont of Datisca glomerata → Frankia → Frankiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 609
ATGCCCGCTACGGTGGGCGCGGTGACCGACGTTCGGACCCGGCTCAGCACCACCGACGACTGGGTGGCCGAGATCGACGCCGCACGGCAGGGTGACGACGAGGCGTTCCGGTCGCTGTACCGGGAAGTGCACCCCAACCTGTTGCGATACCTGCGGGCGCTGGTCGGCGCCGACGCCGAGGACGTGGCGTCCGAGGCGTGGCTGCACATCATCCGGGACCTGCACACTTTCCAAGGCGACGGGGCCGGCTTCCGGGCGTGGGCCGCGACGGTGGCGCGCCACCGGGCGATGGATCATCTGCGCCGGTCCCGCAGCCGGCCGGTCAGTCCGATCCCGCTCGACGCGCTGCCCGATCAGCCCGGCCCGCAGGACACCGCCGGCCAGGCGTTCGAGTCACTGTCGGCACGGGCGGCCGTCGCCCTGATCGCCACCCTGCCGCGCGAGCAGGGCGAGGCGGTACTGCTGCGGGTGTTGTTCGGGCTCAACGTGGAGGTGACCGCGCGGATACTCGGAAAGCGTCCCGGGGCGGTACGCACGTCCACCTACCGGGGCCTGCGCCGGCTCGCCCAGCTTCTCGGCCCGGATCGACCCGGAGAGGTGCCGTCATGA
PROTEIN sequence
Length: 203
MPATVGAVTDVRTRLSTTDDWVAEIDAARQGDDEAFRSLYREVHPNLLRYLRALVGADAEDVASEAWLHIIRDLHTFQGDGAGFRAWAATVARHRAMDHLRRSRSRPVSPIPLDALPDQPGPQDTAGQAFESLSARAAVALIATLPREQGEAVLLRVLFGLNVEVTARILGKRPGAVRTSTYRGLRRLAQLLGPDRPGEVPS*