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13_1_20cm_3_scaffold_1676_16

Organism: 13_1_20CM_3_Actinobacteria_71_11

partial RP 40 / 55 MC: 3 BSCG 35 / 51 MC: 4 ASCG 12 / 38 MC: 5
Location: 11437..12147

Top 3 Functional Annotations

Value Algorithm Source
Putative transmembrane anti-sigma factor n=1 Tax=Amycolatopsis azurea DSM 43854 RepID=M2PMM7_9PSEU similarity UNIREF
DB: UNIREF100
  • Identity: 58.7
  • Coverage: 235.0
  • Bit_score: 265
  • Evalue 6.50e-68
Putative transmembrane anti-sigma factor {ECO:0000313|EMBL:EMD25773.1}; TaxID=1238180 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis a UNIPROT
DB: UniProtKB
  • Identity: 58.7
  • Coverage: 235.0
  • Bit_score: 265
  • Evalue 9.20e-68
Hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 57.1
  • Coverage: 233.0
  • Bit_score: 260
  • Evalue 5.90e-67

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Taxonomy

Amycolatopsis azurea → Amycolatopsis → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 711
ATGGAGCACGATCGTTCCCCGCTGGCCGCCTACGTCCTGGGTGGCCTGAGCGACGAGGAGAAGGCGGCGCTCGACGCCCACCTGGCCGAATGCGACGAGTGCCGGGCGGAGCTGACCGAGCTGGGTGAGCTGGAAGCGATGCTCGGTGAGGTACCGCCGGAAGCCTTTCTGGACGGTCCGCCGGAGGGCGGCGACCTGCTGCTGCAGCGCACGCTGCGGCAGGTCCGCAAGGAGCGGGTGCAGGCCGGCCGGCCGCGCCGCCTCCTGGTCGCGGCCGGCGTCGCCGGCCTGGTCGCCGCCGCCCTCGCCGGGGGCACGCTGATCGGGCGGGGCACCGCCCCTGCACCGCAGGCCGGCGGAGGGGGTACCCCGACCGCCAGCGCGACGGCCGCACCGTCGCCGAGCGGCGTGCGGACGTTCGCGGCCAAGGACCCGAACACCGGCGCCTCGATGACGGTGACCCTGACCCCGGCCGCCGGCTGGGTCAAGCTGCACGTCAAGGCCGAGGGCATCAAGCAGGGGCAGCGGTGCGTCCTCACCGTCGTGGACAGGTCCGGGCACCACATGCAGGCGGGGAGCTGGCTCGTCTCGGCCAACGGCGAGAAGAACGGCACCTCGCTGGACGGCACCGCGCTCGTCGCGCCGGCCGACGTGGCCTCGGTCGACGTGGTGACGATGGAGGGTCAGACGCTGGTCTCCGTGCCGGCCTGA
PROTEIN sequence
Length: 237
MEHDRSPLAAYVLGGLSDEEKAALDAHLAECDECRAELTELGELEAMLGEVPPEAFLDGPPEGGDLLLQRTLRQVRKERVQAGRPRRLLVAAGVAGLVAAALAGGTLIGRGTAPAPQAGGGGTPTASATAAPSPSGVRTFAAKDPNTGASMTVTLTPAAGWVKLHVKAEGIKQGQRCVLTVVDRSGHHMQAGSWLVSANGEKNGTSLDGTALVAPADVASVDVVTMEGQTLVSVPA*