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13_1_20cm_3_scaffold_2081_3

Organism: 13_1_20CM_3_Actinobacteria_71_11

partial RP 40 / 55 MC: 3 BSCG 35 / 51 MC: 4 ASCG 12 / 38 MC: 5
Location: comp(2329..3051)

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=263358 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Verrucosisp UNIPROT
DB: UniProtKB
  • Identity: 75.1
  • Coverage: 237.0
  • Bit_score: 352
  • Evalue 5.80e-94
Pseudouridine synthase n=1 Tax=Verrucosispora maris (strain AB-18-032) RepID=F4F4R1_VERMA similarity UNIREF
DB: UNIREF100
  • Identity: 75.1
  • Coverage: 237.0
  • Bit_score: 352
  • Evalue 4.10e-94
  • rbh
pseudouridine synthase similarity KEGG
DB: KEGG
  • Identity: 75.1
  • Coverage: 237.0
  • Bit_score: 352
  • Evalue 1.20e-94
  • rbh

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Taxonomy

Verrucosispora maris → Verrucosispora → Micromonosporales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 723
ATGCCGGACGGTGACCGGCTCCAGAAGGTGCTCGCGGCCGCCGGGATCGGCTCCCGGCGGGCCTGCGAGGAGCTGATCGACGCGGGTCGGGTGACCGTCGACGGGCGGGTCGCCACGCTCGGTGACAAGGTCGACCCGGCGGCGGCGGAGATCTACGTCGACGGCGAGCGGGTCGTCACCGATACCCGGCTGGTGTACCTGGCGATGAACAAGCCGCGCGGCGTGGTGTCCACCATGGACGACGAGCGGGGCCGGGCGGCGCTGGCCGACTACCTCGACCACGTACCGCAGCGGGTGTTCCACGTCGGCCGGCTCGACGCCGACAGCGAGGGCCTGCTGCTGCTGACCAACGACGGGGCGCTCGCGCACCGGCTCACCCATCCCTCGTTCGGCGTGGCCAAGACGTACCTGTGCGAGGTGCCCGGTCCCGTACGGCGGGGCCTGGGCCGGCAGCTCACCGCCGGCGTCGAGCTGGAGGACGGGCCGGCGAAGGCCGACGCGTTCCGGGTCGTCGACTCGGTACCGGGGCGGGTGCTCGTCGAGGTCGTCATCCACGAGGGGCGCAAGCACATCGTGCGCCGGCTGCTGGCCGAGTGCGGGTACCCGGTCAACCGGCTCGTCCGTACCGCCATCGGACCGATCAAGCTGGGTGACCTGAAGGCGGGACGTACCCGCCGGCTCAACCGTGGCGAGATCGCCGCGTTGTTCAAAGCAGTGGCCTGA
PROTEIN sequence
Length: 241
MPDGDRLQKVLAAAGIGSRRACEELIDAGRVTVDGRVATLGDKVDPAAAEIYVDGERVVTDTRLVYLAMNKPRGVVSTMDDERGRAALADYLDHVPQRVFHVGRLDADSEGLLLLTNDGALAHRLTHPSFGVAKTYLCEVPGPVRRGLGRQLTAGVELEDGPAKADAFRVVDSVPGRVLVEVVIHEGRKHIVRRLLAECGYPVNRLVRTAIGPIKLGDLKAGRTRRLNRGEIAALFKAVA*