ggKbase home page

13_1_20cm_3_scaffold_21437_5

Organism: 13_1_20CM_3_Actinobacteria_71_11

partial RP 40 / 55 MC: 3 BSCG 35 / 51 MC: 4 ASCG 12 / 38 MC: 5
Location: comp(6801..8351)

Top 3 Functional Annotations

Value Algorithm Source
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=1246995 species="Bacteria; A UNIPROT
DB: UniProtKB
  • Identity: 82.7
  • Coverage: 538.0
  • Bit_score: 878
  • Evalue 6.50e-252
Transcription-repair-coupling factor n=1 Tax=Actinoplanes friuliensis DSM 7358 RepID=U5VRA9_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 82.7
  • Coverage: 538.0
  • Bit_score: 878
  • Evalue 4.70e-252
transcription-repair coupling factor similarity KEGG
DB: KEGG
  • Identity: 82.7
  • Coverage: 538.0
  • Bit_score: 878
  • Evalue 1.30e-252

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Actinoplanes friuliensis → Actinoplanes → Micromonosporales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1551
ATGGAGAAGCCGGTACCGATGGACCGGCTGATCTGCGGCGACGTCGGCTACGGCAAGACCGAGATCGCGGTACGGGCGGCGTTCAAGGCGGTACAGGACGGCAAGCAGGTCGCGATCCTCGTCCCGACCACGCTGCTCGCGCAGCAGCACTACAACACGTTCTCCGAGCGGATGAGCCAGTTCCCGGTCGAGATCCGGCAGCTGTCCCGGTTCCAGACGCCGAAGGAATCGGAGCAGACGCTGATCGCCGCGGCCGAGGGCAAGGCCGACATCGTCATCGGCACCCACCGGCTGCTCCAGTCGAGCACGAAGTTCAAGCAGCTCGGCATGGTCGTCGTCGACGAGGAGCAGCGCTTCGGCGTGGAGCACAAGGAGTACCTGAAGGCGCTGCGCACCCACGTCGACGTACTGACCATGTCCGCGACGCCGATCCCGCGCACCCTGGAGATGGCGATCACCGGCATCCGCGAGATGTCCACGATCGCCACGCCGCCGGAGGAGCGGCACCCGGTACTGACGTTCGTCGGCGCGTTCGACGACAAGCAGGTGGCCGCCGCGATCCACCGTGAGCTGCTCCGCGACGGCCAGGTCTTCTACCTGCACAACCGGGTGGAGTCGATCGAGAAGGCGGCCCGCCGCCTGCGCGACCTGGTACCCGAGGCGCGCATCGCGGTCGCGCACGGCCAGATGGGCGAGGACAGCCTGGAGAAGGTGATGGTCGGCTTCTGGGAGAAGGAGTACGACGTCCTCGTCTGCACCACGATCGTCGAGTCCGGCATTGACATCCCCAACGCGAACACGCTCATCGTCGAGCGCGCCGACCTGTACTTCCTCTACCCGGGCGAGAAGCCGCTGACCGAGCACGCGCACGAGCGGCTGGCCACCATCGCGCAGCACACCGAGCTGGGCGCCGGCATGTACGTGGCGATGAAGGACCTGGAGATCCGGGGCGCCGGCAACCTGCTCGGCGGCGAGCAATCCGGCCACATCGAGGGGGTCGGCTTCGACCTGTACGTGCGGATGGTCGGCGAGGCCGTCGCGCAGTTCAAGGGCGAGCGCCCCGAGGAGGAGCCGGATATCAAGATCGACCTCCCGGTCGACGCGCACCTGCCCACCGACTACATCGCCGTCGAGCGCCTCCGCCTGGAGATGTACCGCAAGCTCGCCTCCGCCCGCTCCGCCGCCCAGCTGGACGAGGCGGTCGTGGAGATGCGCGACCGGTACGGCGAGCCGCCCGCCCCGGTGGCCAACCTGGTGGCGGTAGCCCGGTTCCGGTTGCTCGCCAAGGACTACGGGCTCACCGACGTGTCGTTGCAGGGCCGGCACGTCCGGTTCTCGCCGCTGCCGTTGCCGGACTCGAAGCAGCTGCGGCTCAAGCGGTTCTATCCCGACGCGGTCTACAAGGCGGCGACCGACCAGGTGTCGGTACCCCGGCCGATGACCCGCCGGGTCGGTGGCGAGCCGTTGCGTGACACGGCGCTGCTCGACTGGTGCGCCGAACTGCTGACCACGGTGGTGGGGGTCGCGGCCGGGGCAACGACGCCGGCATGA
PROTEIN sequence
Length: 517
MEKPVPMDRLICGDVGYGKTEIAVRAAFKAVQDGKQVAILVPTTLLAQQHYNTFSERMSQFPVEIRQLSRFQTPKESEQTLIAAAEGKADIVIGTHRLLQSSTKFKQLGMVVVDEEQRFGVEHKEYLKALRTHVDVLTMSATPIPRTLEMAITGIREMSTIATPPEERHPVLTFVGAFDDKQVAAAIHRELLRDGQVFYLHNRVESIEKAARRLRDLVPEARIAVAHGQMGEDSLEKVMVGFWEKEYDVLVCTTIVESGIDIPNANTLIVERADLYFLYPGEKPLTEHAHERLATIAQHTELGAGMYVAMKDLEIRGAGNLLGGEQSGHIEGVGFDLYVRMVGEAVAQFKGERPEEEPDIKIDLPVDAHLPTDYIAVERLRLEMYRKLASARSAAQLDEAVVEMRDRYGEPPAPVANLVAVARFRLLAKDYGLTDVSLQGRHVRFSPLPLPDSKQLRLKRFYPDAVYKAATDQVSVPRPMTRRVGGEPLRDTALLDWCAELLTTVVGVAAGATTPA*