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13_1_20cm_3_scaffold_2680_5

Organism: 13_1_20CM_3_Actinobacteria_71_11

partial RP 40 / 55 MC: 3 BSCG 35 / 51 MC: 4 ASCG 12 / 38 MC: 5
Location: comp(4320..5213)

Top 3 Functional Annotations

Value Algorithm Source
lytic transglycosylase n=1 Tax=Salinispora pacifica RepID=UPI00037403DD similarity UNIREF
DB: UNIREF100
  • Identity: 38.0
  • Coverage: 284.0
  • Bit_score: 169
  • Evalue 6.10e-39
Lytic transglycosylase, catalytic {ECO:0000313|EMBL:ABP55564.1}; Flags: Precursor;; TaxID=369723 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Salinispora.;" source="Salini UNIPROT
DB: UniProtKB
  • Identity: 38.0
  • Coverage: 279.0
  • Bit_score: 168
  • Evalue 1.50e-38
lytic transglycosylase catalytic subunit similarity KEGG
DB: KEGG
  • Identity: 38.0
  • Coverage: 279.0
  • Bit_score: 168
  • Evalue 3.00e-39

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Taxonomy

Salinispora tropica → Salinispora → Micromonosporales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 894
GTGGCGCTGCTGGGCAATCCACGTAACCGGGTGATCGCCGCCGCCATCGCGACGACCGTGGGGGTACTCGTACTCATCGCTGCTTTTGTCGGTTTGCCCGGCAGCCCACAGCGCAGCGTCGCCGACCCACTGCCGTCCGTGCTGTTCGAGTCGCCCTCGCCGACCCTCTCGCCGACGCCCACCCCGGAGGCGACCGACAGCCCGTCGCCGTCCCCGACCCGGACGGCCGCCCCGAAGCCGACGAAGAAGAAGGCGCCGCCGCCCCCGCCCAAGCCGGTGACCGTCGTCAAGCCACCGCCGCCCCCGCCCGGCGGCAAGCCGCCCGGCCCGAGCGCGCCGCCCAGCGGCGCCACCTGCCCGCACCTGACCGGGCCGGTCGCCCCACGCTCAGACGTGGCCGCCGCGATGAGCGCGGCCGCCGCCCGCTCGTACCGGCCGACGCTGAGCCTGTCCGACAGCAACCCGCCCTCGATCACCGTCCGGCTGCCGTTGATCGAGGGCATCGGCTGGGAGGAGAGCGGCTGGCAGTCGACCATCGAGTCGTGCGACGGCGGCCTGGGCACCATGCAGGTGATGGCGGACACGGCGAGCTGGATGAACCAGAAGTACGGCACGAGCTACGACCGGGCGTCGCTGACCGGCAACATCAACATCGCCACCGGGTACCTGGCCTGGCTGGCCCGGTACTTCGGGGACAGGTACTTCAACGGGAACTACAGCCTGGCCGGTGACCCGGTGAAGATCGTGCTGCTGGACCTGGTGATCTCGGCGTACCAGGCCGGGTTCGGCAGCGTCGACAACGCCATGGCCGCCGGGCAGGACCTGCCCAACCGGTGGTACGTCGACACCGTCGAGGGGTTCATGACGCACCAGCCGTGGACCGCCCCGAGCTGA
PROTEIN sequence
Length: 298
VALLGNPRNRVIAAAIATTVGVLVLIAAFVGLPGSPQRSVADPLPSVLFESPSPTLSPTPTPEATDSPSPSPTRTAAPKPTKKKAPPPPPKPVTVVKPPPPPPGGKPPGPSAPPSGATCPHLTGPVAPRSDVAAAMSAAAARSYRPTLSLSDSNPPSITVRLPLIEGIGWEESGWQSTIESCDGGLGTMQVMADTASWMNQKYGTSYDRASLTGNINIATGYLAWLARYFGDRYFNGNYSLAGDPVKIVLLDLVISAYQAGFGSVDNAMAAGQDLPNRWYVDTVEGFMTHQPWTAPS*