ggKbase home page

13_1_20cm_3_scaffold_2680_11

Organism: 13_1_20CM_3_Actinobacteria_71_11

partial RP 40 / 55 MC: 3 BSCG 35 / 51 MC: 4 ASCG 12 / 38 MC: 5
Location: comp(9662..10372)

Top 3 Functional Annotations

Value Algorithm Source
Regulatory protein tetr n=1 Tax=Verrucosispora maris (strain AB-18-032) RepID=F4F9A7_VERMA similarity UNIREF
DB: UNIREF100
  • Identity: 60.2
  • Coverage: 226.0
  • Bit_score: 285
  • Evalue 4.70e-74
Micromonospora carbonacea strain JXNU-1 contig1, whole genome shotgun sequence {ECO:0000313|EMBL:KIR65426.1}; TaxID=47853 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micr UNIPROT
DB: UniProtKB
  • Identity: 64.1
  • Coverage: 231.0
  • Bit_score: 301
  • Evalue 8.80e-79
TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 60.2
  • Coverage: 226.0
  • Bit_score: 285
  • Evalue 1.30e-74

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Micromonospora carbonacea → Micromonospora → Micromonosporales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 711
GTGTCCGATACGTTCATGCCTGTGACGACGCCTGCCGACGAGCCGGTACTGCGCGGTGAGCAGACCCGCCGGCTGATCGTCGACACGGCGGTACGGCTGTTCCGCGAGCACGGGTACGAGCGGACCACGATGCGGGGCATCGCGCAGGCGGCCGGACTGTCCGTCGGCAACGCGTACTACTACTTCCCGTCCAAGGAGCACCTGGTCCAGGAGTTCTACGCGCGGATCCAGGACGAGCACCGCGCCGCGCTGGAACCGTTGCTGGCCAGCCGGACCGGGTTCGCCGACCGGCTCCACGCGGCGTACCGGACCGGGCTGGACGCGATGCGCCCGTACCACGGGTTCGCCGGGAAGTTCTTCCGCATCGCGGCCGACCCGCAGTCGCCGGTGAGCCCGTTCAGCGCCGAGTCCACACCGGCCCGCGAGCGTAGCGTCGCGCTGTTCCGGGAGGTGGTCGCCGGCAGCACGACGAAGATCGACCCGGAGCTGCGCGCGGACCTGCCGGAGCTGCTGTGGTTGCTGCACATGGGGGTGACGCTGTTCTGGGTGCACGACCGCTCGCCGGGGCAGGCGAAGGCGGCGCTGCTGGTCGACCGGGCGGTACCGCTGGTGGACCGGCTGGTCGGGCTGTCCCGGCTGAAGGTGCTCCGGCCGCTGACCCGGGAGGTCATCGCGCTGTACCGGGCGCTGCGGTCCGGACCCGCCAGCTAG
PROTEIN sequence
Length: 237
VSDTFMPVTTPADEPVLRGEQTRRLIVDTAVRLFREHGYERTTMRGIAQAAGLSVGNAYYYFPSKEHLVQEFYARIQDEHRAALEPLLASRTGFADRLHAAYRTGLDAMRPYHGFAGKFFRIAADPQSPVSPFSAESTPARERSVALFREVVAGSTTKIDPELRADLPELLWLLHMGVTLFWVHDRSPGQAKAALLVDRAVPLVDRLVGLSRLKVLRPLTREVIALYRALRSGPAS*