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13_1_20cm_3_scaffold_2760_6

Organism: 13_1_20CM_3_Actinobacteria_71_11

partial RP 40 / 55 MC: 3 BSCG 35 / 51 MC: 4 ASCG 12 / 38 MC: 5
Location: 4712..5503

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Micromonospora sp. ATCC 39149 RepID=C4REF0_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 34.5
  • Coverage: 267.0
  • Bit_score: 140
  • Evalue 2.10e-30
Micromonospora carbonacea strain JXNU-1 contig1, whole genome shotgun sequence {ECO:0000313|EMBL:KIR65748.1}; TaxID=47853 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micr UNIPROT
DB: UniProtKB
  • Identity: 34.8
  • Coverage: 267.0
  • Bit_score: 141
  • Evalue 1.70e-30
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 35.5
  • Coverage: 265.0
  • Bit_score: 138
  • Evalue 2.90e-30

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Taxonomy

Micromonospora carbonacea → Micromonospora → Micromonosporales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 792
ATGACCGCCTGTGCGCCCGAACGCATCGCGCTCGCCTCCTACGCCCTCGGCGTGCTCGACGACGCGGACAGCGCCGAGCTGGAGGCCCACCTCGCCGACTGCGACGAGTGCGCCAACGAGCTGGCGGCCCTGCTCCCGACCGTCGGCGCCCTGGCGACCGTCGACGGCGAGGCGTTCGTCCGTACCGAGCTCGTCACCAACCTGGAGCTCCCCAAACGCGGCATCGTCGGCAGCCGCCCGCACAAGCTCGGCAAGCGACTGCCGCTGTCCGTGGCCGGCCGCCAGCTACAGGTGTCGGCCAAGGCTCTCGTGCTGACCGCGCTGGTGGTCGTGGGGCTGGCCCTGGTGATGATCCCGTACGCCGCCGGGCCGAGCCGGGCGGACCTGAACGGTCGCAACAGCCCACCACCCGCGACCGCCGGTGCCGCACCGACGCAGGCGCCCAGCTCCGCCCCGCCGGCGGGCCGGTTCCAGGACACCGACCCGGGAACCGGTGCCCACCTGGATTTGACGATCACGGATACCCGGTCGGGGAGCCACCTGGCGCTGTCGCTGGACCACGTCCCGGGTCCCTTGCACGCCCGGCTGGTCGTCTTCGACACGAGCGGCGGCCTCGAGGTGCTGTCGAGCTGGCAGGTGCCGCCGGACGGGTACGGCACGCCGGCCCATCCGGCGCCGTTGGAGCTGCAGGCCGACAGCAGGCTGCCCCGTGGCCGGATCACCCGGGTCGAGGTGCAGGTGGTGGACCAGAACGGCGCTGGCGCTGGGCTGGTCGGCGTAGCACTGCAGTGA
PROTEIN sequence
Length: 264
MTACAPERIALASYALGVLDDADSAELEAHLADCDECANELAALLPTVGALATVDGEAFVRTELVTNLELPKRGIVGSRPHKLGKRLPLSVAGRQLQVSAKALVLTALVVVGLALVMIPYAAGPSRADLNGRNSPPPATAGAAPTQAPSSAPPAGRFQDTDPGTGAHLDLTITDTRSGSHLALSLDHVPGPLHARLVVFDTSGGLEVLSSWQVPPDGYGTPAHPAPLELQADSRLPRGRITRVEVQVVDQNGAGAGLVGVALQ*