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13_1_20cm_3_scaffold_28270_6

Organism: 13_1_20CM_3_Actinobacteria_71_11

partial RP 40 / 55 MC: 3 BSCG 35 / 51 MC: 4 ASCG 12 / 38 MC: 5
Location: comp(4956..5222)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Actinoplanes globisporus RepID=UPI0003729E9E similarity UNIREF
DB: UNIREF100
  • Identity: 79.5
  • Coverage: 83.0
  • Bit_score: 131
  • Evalue 5.50e-28
Transcriptional regulatory protein degU {ECO:0000313|EMBL:AGZ42547.1}; TaxID=1246995 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes friu UNIPROT
DB: UniProtKB
  • Identity: 79.8
  • Coverage: 84.0
  • Bit_score: 130
  • Evalue 1.30e-27
LuxR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 77.0
  • Coverage: 87.0
  • Bit_score: 130
  • Evalue 2.60e-28

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Taxonomy

Actinoplanes friuliensis → Actinoplanes → Micromonosporales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 267
GTGGTGCTGCTCGGGCGTACCCGGCGGGCGCTGCGCCGGCACGCGATCCGCCGCGACATCCGCGGTCCCCGCTCCGGCGACGACCTCACCGAGCGCGAACGCGAGGTGCTCCGGCTGGTCGCACGGGGTGAACCGACGCGGCGCATCGCTGGACAGTTGGGCATCTCCCGCGAGACGGTGGAAACCCATATCCGTTCGGGTATGCGCAAACTGGGTGCGCGTACCCGGACGGAGGCGGCCGCTCTCGCGCTGGAGGTCCTCGGATGA
PROTEIN sequence
Length: 89
VVLLGRTRRALRRHAIRRDIRGPRSGDDLTEREREVLRLVARGEPTRRIAGQLGISRETVETHIRSGMRKLGARTRTEAAALALEVLG*