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13_1_20cm_3_scaffold_3701_11

Organism: 13_1_20CM_3_Actinobacteria_71_11

partial RP 40 / 55 MC: 3 BSCG 35 / 51 MC: 4 ASCG 12 / 38 MC: 5
Location: comp(11023..11526)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase subunit sigma-70 n=1 Tax=Salinispora pacifica RepID=UPI000374394E similarity UNIREF
DB: UNIREF100
  • Identity: 61.8
  • Coverage: 173.0
  • Bit_score: 199
  • Evalue 2.40e-48
RNA polymerase sigma-E factor {ECO:0000313|EMBL:EWM66826.1}; TaxID=457406 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora sp. M42.;" UNIPROT
DB: UniProtKB
  • Identity: 60.8
  • Coverage: 158.0
  • Bit_score: 190
  • Evalue 2.70e-45
putative RNA polymerase ECF-subfamily sigma factor similarity KEGG
DB: KEGG
  • Identity: 61.7
  • Coverage: 162.0
  • Bit_score: 189
  • Evalue 9.10e-46

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Taxonomy

Micromonospora sp. M42 → Micromonospora → Micromonosporales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 504
GTGGACGCTCGGGCGGAGGCGGAGTTCACCCGGTTCGTCGCGGACCGTACCGTCGCGCTGCTCCGGGCCGCCCACGCGCTGACCGGCGACCAGCACGCCGCCGAGGACCTGGTGCAGAACGCGCTGGCCAAGGCGATGCTGCGGTGGCGGCACATCGAGGAGAACCCCGAGGCGTACGTGCGCCGCATCCTCTACCACGACCACATCTCCGGCTGGCGGAAGCGCCGGCGGCGACCGGAGACGCCGATGGCGGTACTCCCCGAGTCACCCGACGCCGACGGTACCGACGGCGCCCACCTGCGGATGCTTCTGCGAGCCGCGCTGCTGGAGCTGCCGCCCCGGCAGCGCGCCGTGATCGTGCTGCGTTACCTCGACGACCGTTCCGAACGCGAGGTCGCCGAGATCCTCGGCTGCCGGGAGGGTACCGTCGCCAGCCAGGCCTCGCGGGCGCTGGCCAAGCTGCGCCGGCTGGTACCGGCCCCGGTGACGGAGGCCTGGCGATGA
PROTEIN sequence
Length: 168
VDARAEAEFTRFVADRTVALLRAAHALTGDQHAAEDLVQNALAKAMLRWRHIEENPEAYVRRILYHDHISGWRKRRRRPETPMAVLPESPDADGTDGAHLRMLLRAALLELPPRQRAVIVLRYLDDRSEREVAEILGCREGTVASQASRALAKLRRLVPAPVTEAWR*