ggKbase home page

13_1_20cm_3_scaffold_4365_8

Organism: 13_1_20CM_3_Actinobacteria_71_11

partial RP 40 / 55 MC: 3 BSCG 35 / 51 MC: 4 ASCG 12 / 38 MC: 5
Location: comp(6421..7986)

Top 3 Functional Annotations

Value Algorithm Source
Putative phytoene dehydrogenase n=1 Tax=Micromonospora lupini str. Lupac 08 RepID=I0KYF3_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 75.9
  • Coverage: 531.0
  • Bit_score: 795
  • Evalue 2.30e-227
Micromonospora carbonacea strain JXNU-1 contig1, whole genome shotgun sequence {ECO:0000313|EMBL:KIR65571.1}; TaxID=47853 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micr UNIPROT
DB: UniProtKB
  • Identity: 76.8
  • Coverage: 530.0
  • Bit_score: 804
  • Evalue 1.20e-229
fad dependent oxidoreductase similarity KEGG
DB: KEGG
  • Identity: 75.2
  • Coverage: 529.0
  • Bit_score: 793
  • Evalue 4.30e-227

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Micromonospora carbonacea → Micromonospora → Micromonosporales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1566
ATGAGCGCGCGCCAGATTCCGCCCAGCGCGGACGTCGTCATCGTCGGGGCCGGACACAACGGCCTGGTCTCCGCGATCCTGCTGGCCCGGGCCGGGCTGTCGGTCGTGGTGCTGGAGGCGAACGGGACGATCGGCGGGGCCACCCGCACCGAGCGGCCGTTCCCGAAGGTGCCGGAGCTGGGCCAGTCCACCGGCTCGTACCTGCTCGGCCTGATGCCACCGGAACTGCTGCGCACGCTCGACCTGACGATCCCGGTGCTGCGCCGGGATCCGCACTACTTCCTGCCGACCCCGGGACCGGGCGCGTACCTGTTGTTCGGCTCCGACCGGGCGGCCACCCGCGAGCAGCTCCAGCGGTCCTTCTCCGCCCAGGACGTGGCCGCCGACGACGCGATGCAGGCCGAGATCGCGGCGCTGCGGGCGGACCTCGCCCCGGCCTGGCTGGGTGAACCGAGGTCCGTCGAGGAGACCGCCGAGGTCTTCGTGCGGCCCGCGCTGCGCCGGGCTTTCATTGATCTGGTACGGGGTTCCGTGGCCGACTACCTCGCCCGGTTCGACTTCCGTTCCGAACTGCTCCTGTCGATGTACGCGGTGACCGACGGCCTGTCCGGGGTCAACGCCGGCCCGGACGACCCCGGCACCGGGCACAACTTCCTGGTGCACAACATGTGCCGGCTACCCGGCTCGGACGGCACCTGGATGATCGCCGCCGGCGGGATGGGCACCGTCTCGGGTACCTTCGCGCAGGCCGCGGTATCCGCCGGTGCGCAGATCTTCGGCGGGGTACCGGTGGCCGAGGTCTTCACCGATGCCGGAGCCGTCGCGGGGGTACGGACGGCTGACGGGCGCGAGGTGCTGGCCGAGGTGGTACTCGCGGCGTGCGACCCGTACCAACTGATGGCCCTTGCCGAACTGCCGCCGGAGCTGACCGCGCACCTGCAGTCGGTGCGCCGGACCGGCACCACCCTGAAGGTCAACCTCGCGCTGTCCGGCCTGCCGCGCTTCACCTGCCTCCCGCCGGCGGCGCCGAGCCCGTTCGGCTCCACGATCCACCTGCTGCCCGGCTCCGGCTCGGGCGCCCCGATGGGCGAGCTGCGGGCGATGTGGGCCCAGGTGCAGCGGGGTGAGCTGCCCGCCGAGCCGACGATGGAGTGGTACGTGCACACCACGGTCGACCCGTCGTTGCAGGACCCGGCCGGGCACCACTCGTCGGCGCTGTTCGTCCAGTCGGTGCCGTACGCCCCGGCCGGTACCACCTGGGAAGCCGCCCTACCGTCCTATGTGGACAGTCTGCTGGCGATCTGCGACCGGTACGCGCCGGGCACCTCCGACCTCGTGGTCGACACGTTCCCGCTGACCCCGCCCGGCATCGAGGAACACTTCGGGATCACCGGCGGGCACATCCACCACGTCGACAACACGGTCTCGTTCACCGACCGGATGCCGTACGCCACCGGCATTCCCGGCCTGTACGCCGGCAGTGCCGGCTGCCACCCGGCCGGCAGCGTGATCGGCGCGGCCGGCCACAACGCGGCCAAGCGGATCCTGGCCGACCTAAATCTTTGA
PROTEIN sequence
Length: 522
MSARQIPPSADVVIVGAGHNGLVSAILLARAGLSVVVLEANGTIGGATRTERPFPKVPELGQSTGSYLLGLMPPELLRTLDLTIPVLRRDPHYFLPTPGPGAYLLFGSDRAATREQLQRSFSAQDVAADDAMQAEIAALRADLAPAWLGEPRSVEETAEVFVRPALRRAFIDLVRGSVADYLARFDFRSELLLSMYAVTDGLSGVNAGPDDPGTGHNFLVHNMCRLPGSDGTWMIAAGGMGTVSGTFAQAAVSAGAQIFGGVPVAEVFTDAGAVAGVRTADGREVLAEVVLAACDPYQLMALAELPPELTAHLQSVRRTGTTLKVNLALSGLPRFTCLPPAAPSPFGSTIHLLPGSGSGAPMGELRAMWAQVQRGELPAEPTMEWYVHTTVDPSLQDPAGHHSSALFVQSVPYAPAGTTWEAALPSYVDSLLAICDRYAPGTSDLVVDTFPLTPPGIEEHFGITGGHIHHVDNTVSFTDRMPYATGIPGLYAGSAGCHPAGSVIGAAGHNAAKRILADLNL*