ggKbase home page

13_1_20cm_3_scaffold_44902_14

Organism: 13_1_20CM_3_Actinobacteria_71_11

partial RP 40 / 55 MC: 3 BSCG 35 / 51 MC: 4 ASCG 12 / 38 MC: 5
Location: comp(12778..13476)

Top 3 Functional Annotations

Value Algorithm Source
Putative transmembrane anti-sigma factor n=1 Tax=Micromonospora lupini str. Lupac 08 RepID=I0KV72_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 40.7
  • Coverage: 243.0
  • Bit_score: 133
  • Evalue 2.20e-28
Putative transmembrane anti-sigma factor {ECO:0000313|EMBL:CCH15469.1}; TaxID=1150864 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora UNIPROT
DB: UniProtKB
  • Identity: 40.6
  • Coverage: 244.0
  • Bit_score: 133
  • Evalue 3.10e-28
transmembrane anti-sigma factor similarity KEGG
DB: KEGG
  • Identity: 37.5
  • Coverage: 240.0
  • Bit_score: 131
  • Evalue 2.40e-28

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Micromonospora lupini → Micromonospora → Micromonosporales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 699
GTGAGGTGTACGCAGACCGTGGAGGCCGGCGTATACGTTCTCGGTGCGCTCGCCCCCGCCGAACGGTCCGCCTACGAGCGGCACCTGCCGACCTGTCCCGACTGCCGTGACGAGGTCGCGGAACTGGCCGTACTGCCCGGGTTGCTGGGCCGGCTGGACGCCGCCTCGGCCGCCTCGATCGGGCGGCCGGTACCGGTCGCGCCGCGCGCCGCCCTGACCGCCGCCCTGACCGGCGCGCAGACCGCGCGGAAGCGCTCCCGGCGCTGGCGTCGCTGGGAGCGCGGTGTCACGCTCGCGGTCGCCGCCTGCCTCGCGCTCTTCATCGGGGTCGGCACCGCGATGCTCAGCAGGCCGGCCGCGCCGACCCCGGTACTGGCCGCGATGTCCCCGCTCGACAAGGACGCCCAGGTGACCGCGCTGGTCGGGTACTGGCCGGATCCCAAGGGCGGCACGGACATCCGGATGACCTGCGTGTACGCCGACGCGACCGGCGCCACGAAGCACGACGACCCGGTCGTCCGGCTCGACCTCTGGGTGATCCCGCGCGACGGTGGCCCGGGCAGGTCGGTCTGGTACTGGGACGCCGGGCCGGGGTACCGGGACACGTTCTGGGCGGAGTCCGACCTGAAGCCGGACCAGATCGCGCGGCTCGAGGTACGGCGCGGGGACGCGGTCCTGCTCGTCTACAAGGCCGCCTGA
PROTEIN sequence
Length: 233
VRCTQTVEAGVYVLGALAPAERSAYERHLPTCPDCRDEVAELAVLPGLLGRLDAASAASIGRPVPVAPRAALTAALTGAQTARKRSRRWRRWERGVTLAVAACLALFIGVGTAMLSRPAAPTPVLAAMSPLDKDAQVTALVGYWPDPKGGTDIRMTCVYADATGATKHDDPVVRLDLWVIPRDGGPGRSVWYWDAGPGYRDTFWAESDLKPDQIARLEVRRGDAVLLVYKAA*