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13_1_20cm_3_scaffold_555_18

Organism: 13_1_20CM_3_Actinobacteria_71_11

partial RP 40 / 55 MC: 3 BSCG 35 / 51 MC: 4 ASCG 12 / 38 MC: 5
Location: comp(17152..17763)

Top 3 Functional Annotations

Value Algorithm Source
ribosome maturation factor RimP n=1 Tax=Micromonospora sp. CNB394 RepID=UPI00035C5558 similarity UNIREF
DB: UNIREF100
  • Identity: 59.7
  • Coverage: 211.0
  • Bit_score: 228
  • Evalue 4.50e-57
Ribosome maturation factor RimP {ECO:0000256|HAMAP-Rule:MF_01077, ECO:0000256|SAAS:SAAS00001667}; TaxID=457406 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora. UNIPROT
DB: UniProtKB
  • Identity: 59.5
  • Coverage: 210.0
  • Bit_score: 229
  • Evalue 4.80e-57
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 59.2
  • Coverage: 211.0
  • Bit_score: 228
  • Evalue 2.10e-57

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Taxonomy

Micromonospora sp. M42 → Micromonospora → Micromonosporales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 612
ATGGTCCGTCGGGATCGCGCCGCCGGACGGGGCCCCGGCGCCGGCCGCCGGGATGCCACGCGTCCGGCCCGTACCGCCGGCATCAGTGGTGCCGGCGACCTCGCCGCCCACCGGACCCGGCTACAGGAGGTCATCCGGCCGGTGGTCGAGGCCGCCGGCTATGATCTTGAGGAGCTGGCCGTATCCCGGGCCGGTCGCCGGTATCTGCTGCGGATCACCGTGGACGCCGACGGCGGGGTGAGCCTGGACGCGGTGGCCGACCTGTCGCGCGACATCTCCGCAGCTCTCGACACGGCCGAGGAGACCGGTGGAGACTTCGGCTCGGGGGAGTACGTGCTGGAGGTCAGCTCGCCCGGGGTCGACCGGCCGCTGCGGGAACCGCGACACTGGCGGCGCAACGTCGGCCGGCTGGTGGAGGTACCGGTGGGGGACCGGAAGGTCACCGGTCGGGTGGTCGACGCCGACGAGTCCGGGGTGACCCTGGAGGTCGGCGGGGACCGGCACGGGTACGCCTATCCCGAGCTGGGCGCCGGCCGCGTCCAGGTGGAGTTCGGGCACGTTGACGATCTTGACGACGACATGGATGACGACGCAGAGGAGGACGGGGAGTGA
PROTEIN sequence
Length: 204
MVRRDRAAGRGPGAGRRDATRPARTAGISGAGDLAAHRTRLQEVIRPVVEAAGYDLEELAVSRAGRRYLLRITVDADGGVSLDAVADLSRDISAALDTAEETGGDFGSGEYVLEVSSPGVDRPLREPRHWRRNVGRLVEVPVGDRKVTGRVVDADESGVTLEVGGDRHGYAYPELGAGRVQVEFGHVDDLDDDMDDDAEEDGE*