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13_1_20cm_3_scaffold_5920_1

Organism: 13_1_20CM_3_Actinobacteria_71_11

partial RP 40 / 55 MC: 3 BSCG 35 / 51 MC: 4 ASCG 12 / 38 MC: 5
Location: comp(3..122)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-70 factor, ECF subfamily n=1 Tax=Amycolatopsis orientalis HCCB10007 RepID=R4T238_AMYOR similarity UNIREF
DB: UNIREF100
  • Identity: 72.5
  • Coverage: 40.0
  • Bit_score: 64
  • Evalue 2.90e-08
Uncharacterized protein {ECO:0000313|EMBL:AIG76822.1}; TaxID=208439 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis japonica.;" UNIPROT
DB: UniProtKB
  • Identity: 72.5
  • Coverage: 40.0
  • Bit_score: 65
  • Evalue 1.80e-08
Hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 72.5
  • Coverage: 40.0
  • Bit_score: 65
  • Evalue 3.60e-09

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Taxonomy

Amycolatopsis japonica → Amycolatopsis → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 120
ATGGAGGGGAACGACTGGCTGGTGGACCGGTTCGCCGAGCACCGCACCCACCTGCACGCCGTGGCGTACCGGATCCTCGGCTCGCCGAGCGAGGCCGACGACGCGCTGCAGGAGGCCTGG
PROTEIN sequence
Length: 40
MEGNDWLVDRFAEHRTHLHAVAYRILGSPSEADDALQEAW