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13_1_20cm_3_scaffold_616_19

Organism: 13_1_20CM_3_Actinobacteria_71_11

partial RP 40 / 55 MC: 3 BSCG 35 / 51 MC: 4 ASCG 12 / 38 MC: 5
Location: 13041..14954

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Longispora albida RepID=UPI0003661D4D similarity UNIREF
DB: UNIREF100
  • Identity: 50.7
  • Coverage: 641.0
  • Bit_score: 561
  • Evalue 9.10e-157
  • rbh
Protein translocase subunit SecD {ECO:0000256|HAMAP-Rule:MF_01463}; TaxID=927661 species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum UNIPROT
DB: UniProtKB
  • Identity: 52.4
  • Coverage: 687.0
  • Bit_score: 594
  • Evalue 2.30e-166
protein-export membrane protein secd similarity KEGG
DB: KEGG
  • Identity: 48.9
  • Coverage: 640.0
  • Bit_score: 530
  • Evalue 8.30e-148

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Taxonomy

Cryptosporangium arvum → Cryptosporangium → Frankiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1914
GTGGCCGCACCCGCTGGACACCTGAAGGTGTCGCGATACTTCTTGGTCCTCGCAGTGATCCTCGTGGCCTTGTACGCGCTGGTGTTCCTCACCGGCAACAAGAAGCCACACCCGAAGCTGGGCCTGGATCTGCAGGGCGGGGCGGCCATCACGCTCTCCGCGCTGACCCCCGATGGTAAGGCGCCCAACGCGGCGAGCCTGGACCAGGCCCGGCAGATCATCGCCAACCGGGTCAACGCCAGCGGCGTCACCGAGCCCGAGGTGGTCACCGAGGGCAACCGCAACCTGGTGGTGAGCGTCGCCGGGGGTACCAACGCCGACGAGCTCAAGAAGCTGGTCGCGCCGGCCAAGCTGACCTTCCGCAAGGTGCTGGAGAGCGCGCCGGACAAGCCGACGCCCGGCCCGGAGCCGACCTGCGGGGTGAAGGTGGCCGCGGTCGCGCCGAGCCCGAGCGCCAGCGGCAGCAAGAGCGCCAGTCCCAGCCCGAGTACCAGCGGATCGGCCAAGCCGTCCTCGAGCGCGTCCGCTTCCCCGAGCGCGAGCCCGTCCGCCTCGCCCAGCGCCTCGGCCTCCGGTTCGGCGAGCGCGTCGCCGTCGGTCAACCCGTCCGAGTCGGCCGCCGCCGCGTTGAAGGCCCAGGCGCTGGCCTCGGCCCAGGCCAAGCTCGGACCGGCGTACGTGATGGCCGAGCAGATCCAGGACCCGAGCCAGGCCGACCCCAACACGTTGGCCGCCTTCCGTACGCTGACCTGCACCGAGGTGGCCGCGCTGCCGGCGCAGATGCAGTTCTTCGTCCCGACCGTCACCTGCTCGATGCTCAACGGTCGCGACCCCGGTGCCCTGGAGGACGACAAGGACCCCGTGGTCGCCTGTGACCAGGGCGGCACCACCAAGTACGCCCTCGACGTGGCCAAGGTGCAGGGCACCGACGTCGCCTCCGCCGACAACGGGTACGACCCGCAGAACTACCCGACCGACCCGTGGATCGTGAAGCTGCACTTCACCGGCAAGGGCCAGGGGAAGTGGACGGCGCTGACCCAGGAGGCCATGCAGCAGCAGCAACAGCAGCAACAGCAGAACCCCCAGAGTCAGGGCGGTGCCCAGGTGGCCATCGTGCTGGACAACGAGGTCGTCTCGGCGCCGCAGATCCAGTCGGTGATCGTCGGCGACGCCGTGATCAACGGCGGCGACATCGACGAGAAGAACTCCAAGCTGCTGGCGACCCAGCTCAAGTACGGGGCGCTGCCGCTGAACTTCGCGCTGCAGGACTTCGAGACGGTCAGCCCGACGCTGGGCCTGCAGCAGATGGGGTACGGCCTGCTGGCCGGCGCGATCGGCCTGATCCTGGTCGTGGCGTACTGCCTGTTCTACTACCGGGCGATGGGCCTGGTGGTGATCGCCAGCCTGGCGGCCTCCGGCGGGACGATCTTCGCCGCGCTGGTGCTGCTCGGCCGGTACATGGGCTTCACGCTCAGCCTCGCCGGCATCGCCGGGTTCATCGTGGCCATCGGTATCACGGCCGACTCCTTCGTGGTCTTCTTCGAGCGGTTGAAGGACGAGGTCAAGGACGGCCGTACGGTCCGCAGCGCGGTACCCCGGGCGTGGATCCGGGCCCGGCGTACCATCCTGTCCGCCGACGCGGTGTCGTTCCTCGCCGCCGCCGTCCTGTGGCTGCTCGCGGCCGGCCCGGTGAAGGGCTTCGCCTTCACCCTCGGCCTGTCCACGGTCATCGACCTGCTGGTGGTGTTCCTGTTCACCCACCCGCTGGTCGCGCTCCTGTCCAGATCGAGCGCGTTCACCACACCCCGGTTCTCCGGACTCGGTAATCTGCGCTCGGACAAGGCTCTGGAGGCGGCCGCGCTGGCGGCGGTCAAGTCCCCCCGCTTCGGCGCCGTACGTACGAAGGAGTCCTGA
PROTEIN sequence
Length: 638
VAAPAGHLKVSRYFLVLAVILVALYALVFLTGNKKPHPKLGLDLQGGAAITLSALTPDGKAPNAASLDQARQIIANRVNASGVTEPEVVTEGNRNLVVSVAGGTNADELKKLVAPAKLTFRKVLESAPDKPTPGPEPTCGVKVAAVAPSPSASGSKSASPSPSTSGSAKPSSSASASPSASPSASPSASASGSASASPSVNPSESAAAALKAQALASAQAKLGPAYVMAEQIQDPSQADPNTLAAFRTLTCTEVAALPAQMQFFVPTVTCSMLNGRDPGALEDDKDPVVACDQGGTTKYALDVAKVQGTDVASADNGYDPQNYPTDPWIVKLHFTGKGQGKWTALTQEAMQQQQQQQQQNPQSQGGAQVAIVLDNEVVSAPQIQSVIVGDAVINGGDIDEKNSKLLATQLKYGALPLNFALQDFETVSPTLGLQQMGYGLLAGAIGLILVVAYCLFYYRAMGLVVIASLAASGGTIFAALVLLGRYMGFTLSLAGIAGFIVAIGITADSFVVFFERLKDEVKDGRTVRSAVPRAWIRARRTILSADAVSFLAAAVLWLLAAGPVKGFAFTLGLSTVIDLLVVFLFTHPLVALLSRSSAFTTPRFSGLGNLRSDKALEAAALAAVKSPRFGAVRTKES*