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13_1_20cm_3_scaffold_634_18

Organism: 13_1_20CM_3_Actinobacteria_71_11

partial RP 40 / 55 MC: 3 BSCG 35 / 51 MC: 4 ASCG 12 / 38 MC: 5
Location: comp(20068..21318)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-70 factor, ECF subfamily n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9PG64_9DELT similarity UNIREF
DB: UNIREF100
  • Identity: 73.0
  • Coverage: 422.0
  • Bit_score: 597
  • Evalue 9.80e-168
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=316330 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PT UNIPROT
DB: UniProtKB
  • Identity: 73.6
  • Coverage: 417.0
  • Bit_score: 602
  • Evalue 4.30e-169
ECF subfamily RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 74.7
  • Coverage: 411.0
  • Bit_score: 587
  • Evalue 2.90e-165

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Taxonomy

Microbispora sp. ATCC PTA-5024 → Microbispora → Streptosporangiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1251
GTGGCACCCTCGCCGACGCAGCGCGTGGTCGACGCGGTCTGGCGGATCGAATCCGCCCGGCTGATCGCCGGCCTCACCCGGATCGTCCGTGACCTGGGCCTCGCCGAGGAACTGGCGCAGGACGCGCTCGTCGCCGCGCTGGAACAGTGGCCCGAGTCAGGCGTCCCGGACAATCCGGGCGCCTGGCTCATGGCCGTGGGCAAGCGCCGGGCCATCGACCTGATCCGCCGGCAGGACCGGTACGACCGCAAGCTCGTCGAGCTGGCCCGGGATCTTTCCACCGAGGAGCCCGAACCGGAGCCGGCCGCCGCGATCGAGGACGACCTGCTGCGCCTGGTGTTCATCGCCTGCCACCCGGTGCTGTCCGCGCCCTCCCGGTGCGCGCTGACGTTGCGGGTACTCGGGGGGTTGAGCACCGACGAGATCGCCCGGGCGTACCTGGTGCCCGAGCCCACCGTCGCGCAGCGGATCGTGCGGGCCAAACGTACCCTCGCCCAGGCGCAGGTACCGTTCGAGGTGCCCGAGGGGGCGGAGCTGGCCGCCCGGCTGGGATCGGTCCTGGAGGTCATCTACCTGATCTTCAACGAGGGGTACGCGGCCACGGCCGGCGACGACTGGATGCGCCCGACGCTGTGCGAGGAGGCCCTGCGGCTGGGCCGGATCGTGGCCGAGCTGATGCCCAAGGAGCCCGAGGTACATGGGCTCGTGGCGCTGCTGGAGATCCAGGCGTCCCGTTCGGCGGCCCGGGTCGGGCCCTCCGGCGAGCCGGTGCTGCTCTACGAGCAGGACCGGGGCCGGTGGAACCAGCTCCTGATCCGGCGCGGCCTGGCCGCGCTGGACCGGGCGGAGGCGCTGGGCGGGGCACCCGGCCCGTACCTGCTCCAGGCGGCCATCGCGGCCTGCCACGCGAGGGCGCGTACCCCGGAGGAGACCGACTGGGTCCGGATCGCCGCGCTGTACCAGGCCCTCGCGCTCCGGACCCCGTCCCCGGTGGTGGAACTGAACCGGGCCGTGGCGGTCGGGATGGCGTACGGGCCGGCGCAGGCCCTGCCGATCGTCGACGCGCTGAGCGCCGAACCCGCGCTGGCCAACTACCACCTGCTGCCGGCGGTACGCGGGGACCTGCTGGTCAAGCTGGGCCGGGGTGCCGAGGCACGGACCGAGTTCGAGCGCGCCGCGACGCTGACCCGCAACGCCCGCGAACGTACCCTGCTGCTCGACCGGGCCGCCGGTACTACCCGACCAGGGTGA
PROTEIN sequence
Length: 417
VAPSPTQRVVDAVWRIESARLIAGLTRIVRDLGLAEELAQDALVAALEQWPESGVPDNPGAWLMAVGKRRAIDLIRRQDRYDRKLVELARDLSTEEPEPEPAAAIEDDLLRLVFIACHPVLSAPSRCALTLRVLGGLSTDEIARAYLVPEPTVAQRIVRAKRTLAQAQVPFEVPEGAELAARLGSVLEVIYLIFNEGYAATAGDDWMRPTLCEEALRLGRIVAELMPKEPEVHGLVALLEIQASRSAARVGPSGEPVLLYEQDRGRWNQLLIRRGLAALDRAEALGGAPGPYLLQAAIAACHARARTPEETDWVRIAALYQALALRTPSPVVELNRAVAVGMAYGPAQALPIVDALSAEPALANYHLLPAVRGDLLVKLGRGAEARTEFERAATLTRNARERTLLLDRAAGTTRPG*