ggKbase home page

13_1_20cm_3_scaffold_765_1

Organism: 13_1_20CM_3_Actinobacteria_71_11

partial RP 40 / 55 MC: 3 BSCG 35 / 51 MC: 4 ASCG 12 / 38 MC: 5
Location: 1..564

Top 3 Functional Annotations

Value Algorithm Source
Transcription attenuator lytR n=1 Tax=Micromonospora sp. ATCC 39149 RepID=C4RHC9_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 44.7
  • Coverage: 188.0
  • Bit_score: 175
  • Evalue 7.10e-41
Micromonospora carbonacea strain JXNU-1 contig1, whole genome shotgun sequence {ECO:0000313|EMBL:KIR66617.1}; TaxID=47853 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micr UNIPROT
DB: UniProtKB
  • Identity: 46.3
  • Coverage: 188.0
  • Bit_score: 179
  • Evalue 4.00e-42
cell envelope-related transcriptional attenuator similarity KEGG
DB: KEGG
  • Identity: 43.1
  • Coverage: 188.0
  • Bit_score: 169
  • Evalue 8.40e-40

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Micromonospora carbonacea → Micromonospora → Micromonosporales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 564
GCGATCGTCAACTTCGCCGGCTTCGAGTCGGTCGTCCAGGCGCTGGGCGGGGTGTCCATGTGCATCGACCAGAAGGTCACCTCGATCCACCTCAACACCGAGGGCAAGGACCTGAAGAAGGGCGGTTCCCCGGCGGTGTACCTGCCCGGTTGCCGGCACCTGGAGCCGTGGCAGGCGCTGGACTACGTACGCCAGCGCCACCTCAAGGGCGGCGACTACGACCGGCAGCGCCACCAGCAGCAGTTCCTCCGGGCGATCCTGCAGGAGGCCCGCGACCAGGGGCTCGACCGCAACCCGATCAAGCTCGACCAGTTCATCCGCTCGGTCGAGGGGTCGCTGGTGGTGGACACCAACGGGATACCGGTGGCGGATCTGGCCTTCGGCCTGCGCAACATCACGCCCTCGACGGTCGTCGGGATCCGGCTGCCGTCACACCCCGACATGATCGGCGGTATCAGCTACGTGCTCGCCGACGACGAGGCACCCGGCCTGTACCAGGCGATCGTGACCGACTCGCTGGACAGCTGGGTAACCGACCACCCGGAGTGGGTGAACCGGGTCTGA
PROTEIN sequence
Length: 188
AIVNFAGFESVVQALGGVSMCIDQKVTSIHLNTEGKDLKKGGSPAVYLPGCRHLEPWQALDYVRQRHLKGGDYDRQRHQQQFLRAILQEARDQGLDRNPIKLDQFIRSVEGSLVVDTNGIPVADLAFGLRNITPSTVVGIRLPSHPDMIGGISYVLADDEAPGLYQAIVTDSLDSWVTDHPEWVNRV*