ggKbase home page

13_1_20cm_3_scaffold_855_8

Organism: 13_1_20CM_3_Actinobacteria_71_11

partial RP 40 / 55 MC: 3 BSCG 35 / 51 MC: 4 ASCG 12 / 38 MC: 5
Location: comp(6488..8737)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, SARP family n=1 Tax=Micromonospora lupini str. Lupac 08 RepID=I0L1B3_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 55.7
  • Coverage: 673.0
  • Bit_score: 705
  • Evalue 4.60e-200
  • rbh
Transcriptional regulator, SARP family {ECO:0000313|EMBL:CCH17610.1}; TaxID=1150864 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora l UNIPROT
DB: UniProtKB
  • Identity: 55.7
  • Coverage: 673.0
  • Bit_score: 705
  • Evalue 6.50e-200
SARP family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 50.3
  • Coverage: 773.0
  • Bit_score: 691
  • Evalue 3.30e-196

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Micromonospora lupini → Micromonospora → Micromonosporales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 2250
GTGTTCAGCGAGATCGTCCGGGCGCACCGGCAGCGGTTGGGCGTCACCCAGGAGGAGCTGGCTGGCCTGGCCGGGGTGAGCGTGCGCAGCATCCGGGAGATCGAGGCTGGCCGGATCAGCCGGCCGCGACCGGGCACGGTGCGGCTGCTCGCCGAGGCGTTCACGCTGGACGGGGCCGACCGGGACGCCTTCTACGCGTCCGCGATCTCCGAGCCGGCGGTACCCGTGCTGGCGGCTCCGCCCGCCCCGCGGCAGTTACCGGCGGCGGTACCGGGATTCGCCGGCCGGGAGCTGTGCCTGAGGCAGCTCGACGGGCTCGCCTTCGACGCGGACGCCGGCGACCTGCCGGCGCTGGGAATCATGGTGATCGACGGGATGGCCGGGGTCGGCAAGACCTCGCTCGCCGTGCACTGGGCGCACCGGGTGGCCGGCCGGTTCCCCGACGGGCAGCTCTACGTCAACCTGCGCGGCTTCGACCCGACCGGCACGGTGGTGAGCGCGGCGGAGGCGATCCGCGGCTTCCTCGACGCGTTCCAGGTCCCGGCCCAGCGCATCCCGGTCGGCGTCGATGCCCAGGCCGCCCTGTACCGCAGCCTGCTCGCCGGCCGGCGGATGCTCATCGTGCTGGACAACGCGCGGGACGCCGAGCACGTGCGGCCGCTGCTGCCCGGTACCCCCGGGTGCCTGGTCGTGGTGACCAGCCGCAACCAGCTCACCGGCCTGGTCGCGGCGGAGGGCGCGCAGCCGGTACCCCTGGACGTGCTCGACACGGCCGGCGCGCGTGAGCTGCTGACCCGGCGGCTCGGCGCCCGGCGGATCGCGGCCGAGCCGGGCGCCGTCCAGGAGATCATCGACCGGTGCGCGCGGCTGCCGCTCACGCTCGCCCTGGCCGCCGCGCGGGCCGCGGCCCGTCCACAGGTACCGCTGGCCGCGCTCGCCGAGCAGCTGCGCGCGACCGGGGGCGGCCTCGCGGCGTTCGCGGTCGACGATCCGGCCACCGACGTGCGGGCCGTCTTCTCGTGGTCGTACCGGACGCTCACGCCCGAGGCGGCCCGGCTGTTCCGGGTACTGGGCCTGCATCCCGGGCCGGACATCGGCGCACCGGCGGCGGCCAGCCTCGCGGGGATCCCGGTCGACCGGGTCGGTGCCCTGCTGGCGGAGCTGACCCGGGCGCATGTGCTGGCCGAGCACACGCCGGGCCGGTACACCTTCCATGACCTGCTGCGGGCCTACGCGACCGACCGGGCGGGCGCCGAGGACAGCGCGGACGACCGGGAGGAGGCGCTGCAGCGGATCCTCGACCACTACCTGCACAGCGCCTACGCCGCCGCGAACGCCTTCGACCCGTACCGGGATCCGATCACCCTGCCGCCGCCGCAGCCGGGGGTGACCCCGGAGCGGTTCGCCGACGCGGGTGCGGCGTTCGCCTGGTTCACCGCCGAGCTGCCGGCGCTGATGGCCGCCGTGCACCGGTCGTCGGTGGTCGGCTTCGACGCGCACACCTGGCAACTCGTCTGGAGCATGGCGGACTTCCTGCACCGGCGCGGGCACTGGTACGACTCGCTGGAGCTGCAACGCGCCGCGCTGGACGCCGCGCGCCGGGCGAGTGACGTGCGCGGGCAGGCATACGGTCACCGCGGGCTCGGGCTGGCCTTCGCCGAGCTGCGCCGCTTCGAGGAGGCGCTGACCGAGCACCGCCGGGCGGTGGAGCTGTACCGCCGGCTCGACGACTACGCGGGCACCGCCCGCGCCTACCTCAACGTCGCCCGCGCCTGCGACCACCTGGACCGCAAGGAGGCCGCGCTGCGCAACGCCGAACAGGCCCTCGCCCTGTACCGGCTGGCCGACGTGCCGGCGGGCGAGGCGCGCGCGCTCAACTCCGTCGGTTGGTACCACGGGCAGCTCGGCAACTACGAGCAGGCGCTCACCTGCTGCTTACAGGCCCTCGACCTGCTGGAGGGGCTGGGCGACCGGTACGCGCAGGCGTACACCCTCGACAGCATCGGCTTCGCCCACCACCACCTCGGCAACTTCGCCGAGGCGATCGAGGCCTACCGGCGCGCCCTGGACCTCAACCAGGACCTGCACGACCGGCGCTTCGAGGCGGAGACGCTCAACGACCTCGGCGACACGTACCGCGCGGCCGGCCGGGCTGACGCGGCCCGCGACGCGTGGAAGCGCTCGGCCGAGATCTTCGACGAGCTCGGCCACACCCGGGCCGAGGACGTCCGCGGCAAGATCAGTCAGTGA
PROTEIN sequence
Length: 750
VFSEIVRAHRQRLGVTQEELAGLAGVSVRSIREIEAGRISRPRPGTVRLLAEAFTLDGADRDAFYASAISEPAVPVLAAPPAPRQLPAAVPGFAGRELCLRQLDGLAFDADAGDLPALGIMVIDGMAGVGKTSLAVHWAHRVAGRFPDGQLYVNLRGFDPTGTVVSAAEAIRGFLDAFQVPAQRIPVGVDAQAALYRSLLAGRRMLIVLDNARDAEHVRPLLPGTPGCLVVVTSRNQLTGLVAAEGAQPVPLDVLDTAGARELLTRRLGARRIAAEPGAVQEIIDRCARLPLTLALAAARAAARPQVPLAALAEQLRATGGGLAAFAVDDPATDVRAVFSWSYRTLTPEAARLFRVLGLHPGPDIGAPAAASLAGIPVDRVGALLAELTRAHVLAEHTPGRYTFHDLLRAYATDRAGAEDSADDREEALQRILDHYLHSAYAAANAFDPYRDPITLPPPQPGVTPERFADAGAAFAWFTAELPALMAAVHRSSVVGFDAHTWQLVWSMADFLHRRGHWYDSLELQRAALDAARRASDVRGQAYGHRGLGLAFAELRRFEEALTEHRRAVELYRRLDDYAGTARAYLNVARACDHLDRKEAALRNAEQALALYRLADVPAGEARALNSVGWYHGQLGNYEQALTCCLQALDLLEGLGDRYAQAYTLDSIGFAHHHLGNFAEAIEAYRRALDLNQDLHDRRFEAETLNDLGDTYRAAGRADAARDAWKRSAEIFDELGHTRAEDVRGKISQ*