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13_1_20cm_3_scaffold_902_14

Organism: 13_1_20CM_3_Actinobacteria_71_11

partial RP 40 / 55 MC: 3 BSCG 35 / 51 MC: 4 ASCG 12 / 38 MC: 5
Location: comp(12604..13173)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-70 factor, sigma-E family n=2 Tax=Micromonospora RepID=D9TBR9_MICAI similarity UNIREF
DB: UNIREF100
  • Identity: 65.8
  • Coverage: 161.0
  • Bit_score: 205
  • Evalue 4.90e-50
RNA polymerase sigma-70 factor, sigma-E family {ECO:0000313|EMBL:ADL48616.1}; TaxID=644283 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromono UNIPROT
DB: UniProtKB
  • Identity: 65.8
  • Coverage: 161.0
  • Bit_score: 205
  • Evalue 6.90e-50
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 65.8
  • Coverage: 161.0
  • Bit_score: 205
  • Evalue 1.40e-50

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Taxonomy

Micromonospora aurantiaca → Micromonospora → Micromonosporales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 570
GTGACCTCCGTCCCGGAGAGCCGCACTGAGATCCGCACGGTGGCCCGGCCGGTCCGGCCGGCCGCCCGCGCGCCCGGCTTCGAGGAGTACGTCGCGGCGCGCGGCGCGGCGCTGCTGCGGTTCACCGCGCTGCTCACCGGGGACATGCACCGGGCCGAGGACCTGGTGCAGGAGGCGCTGGCCCGCGCATACCTGCGCTGGGGCTCGATCCGGCGGGTCGACAACCCGGACGTGTACCTGCGCCGCATGCTCGTCAACGCGGCCCGCTCCTGGTGGCGCCGCCGCGCCAATTGGGAGCTCCCCGTCGCGCAGACCGCCGAGCGGGCCACCCTCGGGGACCTGGGCGCCGAATCGGCCGAGCGGGACGCGATCCGCCGGATGATCGCCGGGCTGCCGCACCGCCAGCGCGCGGTTCTCGTGCTGCGCTACTACGAGGACCTGGACGACGCCACGATCGCGGAGATCCTCGGTTGCTCCGCCATCACCGTCCGTACCCATGCCTTCCGGGCCCTGGCCACGCTGCGCCGGCAGTGCGCGGGGTCCGCGGATTCCACGGGGAGTGCCACATGA
PROTEIN sequence
Length: 190
VTSVPESRTEIRTVARPVRPAARAPGFEEYVAARGAALLRFTALLTGDMHRAEDLVQEALARAYLRWGSIRRVDNPDVYLRRMLVNAARSWWRRRANWELPVAQTAERATLGDLGAESAERDAIRRMIAGLPHRQRAVLVLRYYEDLDDATIAEILGCSAITVRTHAFRALATLRRQCAGSADSTGSAT*