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13_1_20cm_3_scaffold_9446_8

Organism: 13_1_20CM_3_Actinobacteria_71_11

partial RP 40 / 55 MC: 3 BSCG 35 / 51 MC: 4 ASCG 12 / 38 MC: 5
Location: 6586..10452

Top 3 Functional Annotations

View all annotations
Value Algorithm Source
RNA polymerase sigma factor rpoD n=1 Tax=Micromonospora lupini str. Lupac 08 RepID=I0KXF9_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 59.1
  • Coverage: 999.99
  • Bit_score: 1466
  • Evalue 0.0
RNA polymerase sigma factor rpoD {ECO:0000313|EMBL:CCH16256.1}; TaxID=1150864 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora lupini UNIPROT
DB: UniProtKB
  • Identity: 59.1
  • Coverage: 999.99
  • Bit_score: 1466
  • Evalue 0.0
DNA helicase similarity KEGG
DB: KEGG
  • Identity: 57.5
  • Coverage: 999.99
  • Bit_score: 1380
  • Evalue 0.0

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Taxonomy

Micromonospora lupini → Micromonospora → Micromonosporales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 3867
ATGTGGACGTTCCTCGCCTCGGCCCGACGGACCCGGCGGAGCCGAACCCTGCACGACCGCCTCTACGACCTGCGCTACCGCCTCGATGTCGATGTGTCCCGCGTGGAACTCGTGTGGGGCCACGCGATCCTCGCCGCGAAGCTGGACGGGGAACGGGTCAACTACCCGCTCGTCGCCACCCCGGTCGCGATCGAGTACGACGCGGAGACCACGACGGTGAGCGTGGTACCGCAGGGGCCGCCCCGGTTGCAGCCCGACGCGCTGGCCGACGTGGACAACCGGCGGGTCGCCGACCTGCTCGACCTCGGCAACGCCAGCGGCCAGGTCGAGGTCGACCCGTGGGACGCCACGGAACGGCGCGAGTTCGCCGGGCGTGCGCTGCGCCGCCTCGGGTTCGACCCGGTGCTGCGCGAGCCGGGCGCGCCTCCCGTCAACGGTCCGCACGTCATCGACACCGGCGTGCTGTTCATCCGGCCACGCCAGCGGATGGTGCGGCGGTTCCTGGCCGACATGCGCGACCGACTGTCCAGTGTGGACGGTGATGTCGGTGGGCTCGCCAGCATCCTGGCCTACGAACCGAGCCTCCTGGACCGCGACGAGGAGTTCCTCGACACCGGCGCGCGGCTGCTCATGCCGATGCCGACCAACGAGGCGCAGGAGTCGATCGCGCGCCGCTTGGCGGTCCACCGCAACGTCGCCGTGCAGGGCCCGCCGGGCACCGGGAAGACGCACACCATCCGCAACCTCATCTGCCACCTGATGGCACACGGCAAGCGGGTACTCGTGCTGGCGCAGAAGGAGGATCCGCTGCGGGTCCTGCGCGACGGGCTGCCCGAGGAGATCCAACCCTTGTGCCTGGCCATTCTCGGCCGCTCGGCCGACCAGCTCGTGCAGCTCCAGATCGCCGCGCGCGAGCTGTCCGACCGCGCCGCCACGCTGGACCAGCCCGCCGAGGACCGGCGCGCGGCCCGGCTGCTCGCCGACATCGAGCGGGCCGAGGCAGAGATGGCCGAGGCCGAGGACCGGTTGCGCGCCGCCGCCGAGCGCGAGGCCGCGACCTACCAGCTCGACGGGGGTACCGCCACCGCCAGCGAGGTCGGCGAGTGGCTGCGCCGCGAGGCGCCCACGCTGAACCTCATCCCCGACCCGATCCCGGTCGACGTCCCGCCCCCGCTCGAACCGGCCGAGTTCGCCGTGCTCGCCGACATCGCGCGGGAGGTCTCCGCCGAGGACCGCGCCGCCGCCCTCGGCCCCCTGCCGGTGGACGGCCAGCTCCCCACCGGTGAGCAGCTCGCCGCCCGCCGCGATGCGCTGGAGAACGCCCGCAAGGCGGTCGACGCACTGCTCGACCGGGGCATCGCCATCGAGGGCGTGCGCCGGTTCAGCGAACCACAACTCGACGAGCTGGCCCGGAGCCTGCGCACCGAGGCCGACGAGCTGACCCGGCGCGAGGGCAGCTGGACCGACCGGCTCGGTCACCTGGTCCGCGACCCGAGCTGGCAGGCCGTATGGGACGCGCACGCCACCGCGTGCCAGCAGGCGCTCACCGAGCTGGGCCGGCGCACCGCGTTCCTCGCCGGCCGGTCGATCGAGGTACCCGCCGAGCACCTCACCGAACCGCGCCGGCTGCTCGGGCAGCTCGGCGAGATCCGGGGCCGGCTCGCCGAGGGCCGCAAGGTCGGCCGGTTCACCCAGGGCGACCTGCACCGGCTGATGGAGCAGTGCCGGGTCGACGGCGAGCCGGTCCGCACCGTCTCCGACATCGACCTGGTCATCGCGAGCATCGAGCGCGGCCAGCTGCGGGGCCAGCTGGCCACGCGCTGGGCGGAGTGGTCCCAGCGGCTCGGCTTCCCGCTGCCGCCCGGCACCGAGCCGGAGGTGTGGGCCGGCCCGTTGCTCACCACCGCCCTCGGCGCGCTGGACTGGGAACGGCGCCGCTGGCCCGCCCTGTACCAGCAGGTCGTCGCGCTCTACCCGCGCTGCCCGAAGGACATCGACGCCCGTACCCTCGCCGAGCTGGCCGGCGCCGTGGAGGCGTGCGGCAACGTGCTCGTCGCCGACCGGCTCACCGCCGAGCGCCAGGCGCTGGCCGGTTGGGTGGACCAGGTGGCGGCCTCGTCGCCGACGCTGGGGGAGCTGGCCGCCGCCTGGCACTCCGGCGACCTCACGGATTGGGACGACGCGTTGGCCGAGGTCCGTCGACTGTGGACGGTACGGCCGGAGGCGTTGCGCTTCGCGGAACTCGCCGCGCGGCTGCGCCTCGTCGCTCCACAGTGGATGGTGGAGATCGAGAGCGCGGAGGCGCTGCCCGACGGCGGGGAGCACGCGCTGCGCGCGTGGCGCTGGCGGCAGGCGCAGACCTGGTTCGACGAGATGGTCGGCGCTCTGGACACCGCCGCGCTGGGCCGCAAGGTGGAGCGCTGCCGCGACCGCATCCAACACCTGACCCGCGACCTCGTGGTGACGTCGGCGTGGCTGTCGGTCGCCCGTACGCTCGACGACCGGAAGAAGGCCGCGCTGTCCGACTGGACCGCCGCGCTCCGCAAGATCGGCAAGGGTACCGGCAAGAGCGCCGCACACTGGCAGGCCGTCGCCCAGCGCGCCATGTCCGAGGCGGTCGACGCGGTACCCGTCTGGGTCATGTCCATCGACCGCGCGCTGGAGCAGTTCCGGGGCGGCGAGCCGCTCTTCGACGTGGTGATCGTCGACGAGGCGTCCCAGGCCGACGTGTTCGCGCTGCCGGTGCTGAGCCTGGCGCAGCGCGCCGTGGTGGTCGGCGACGACCAGCAGATCGGGCCGCAGATCGTCGGGGTACCCACCGACCGCGTCCAGGCGCTGATCGGCGCGCACCTGACCGACGTACCGTCCGCGGTGCAGTTCGACACCGAGAGCAGCCTCTACGACCACGCGGTACGGCGGTCCCCGGAGCGCATCCTGCTGACCGAGCACTTCCGGTGCGTACCGGCGATCATCTCGTTCTCCAGCGACCACTACTACGACCGGAAGATCCAGCCGCTGCGGGCCGACCTGCCGACCGGCATCGGCGCGCCGGTGCACGCCGTGTTCGTGCCGGGCGGGTTGCGCGAGGAGCGCCCCGACAACGGCTCGGTCAACGTGCCCGAGGCGGAGGCGCTGGTGAGCCGGGTGGCGCTCATCGTGGCCGACCCGGCCTACGACGGGAAGACGCTCGGCGTGGTCAGCCTCCTGTCGACGAGCGGCCAGGCGGCCTACCTGCACCACCGGCTGCGCGAGGAGATCGGGCCGGAGGAGCTCGAACGGCGCCAGCTCCGGGTCGGCGACGCGTACACGTTCCAGGGCGACGAGCGCGACGTGGTGCTGATCTCGATGGTGGTAGCCGGCAGTGGCTTTGGCGCGTTCAGCAAGCGCGACTACCACCGCCGGATCAACGTGGCCGCCTCCCGGGCCCGCGACCAGCTCTGGCTCTTCCACTCCGTGCAGATCGGTGACTTCTCGGCCGACGACGCCCGGGCGCTGCTGCTCGCGTACTGCCAACGACCGAAGGCGGCGGAGCCGGTACCAACTGAGGTTGTCACCAACGATTTCGAGCGGGCGGTGCTGCAGCGCCTGCGGGAGCGGGGTTTGAACCCGATACCGCAGTTCCGCATCGGCGCGTTCCGGATCGATTTCGTCCTGCCCGCGCCCGATGGGCGGCGCCTCGCGATCGAGTGCGACGGCGACCGCTACCAGGGGCCCGACGCGTTCGCGGCGGACCTGCGGCGGCAGGCGATCCTGGAGCGGGTGGGCAACGCGACGTTCGTGCGGCTGCGCTCCAGCGTCTTCCACCGCGACCCGGAGGTCGCTCTTGCGCCAATCTGGGACCGCGCGCGGGAGTTGGGCTTAACCTGA
PROTEIN sequence
Length: 1289
MWTFLASARRTRRSRTLHDRLYDLRYRLDVDVSRVELVWGHAILAAKLDGERVNYPLVATPVAIEYDAETTTVSVVPQGPPRLQPDALADVDNRRVADLLDLGNASGQVEVDPWDATERREFAGRALRRLGFDPVLREPGAPPVNGPHVIDTGVLFIRPRQRMVRRFLADMRDRLSSVDGDVGGLASILAYEPSLLDRDEEFLDTGARLLMPMPTNEAQESIARRLAVHRNVAVQGPPGTGKTHTIRNLICHLMAHGKRVLVLAQKEDPLRVLRDGLPEEIQPLCLAILGRSADQLVQLQIAARELSDRAATLDQPAEDRRAARLLADIERAEAEMAEAEDRLRAAAEREAATYQLDGGTATASEVGEWLRREAPTLNLIPDPIPVDVPPPLEPAEFAVLADIAREVSAEDRAAALGPLPVDGQLPTGEQLAARRDALENARKAVDALLDRGIAIEGVRRFSEPQLDELARSLRTEADELTRREGSWTDRLGHLVRDPSWQAVWDAHATACQQALTELGRRTAFLAGRSIEVPAEHLTEPRRLLGQLGEIRGRLAEGRKVGRFTQGDLHRLMEQCRVDGEPVRTVSDIDLVIASIERGQLRGQLATRWAEWSQRLGFPLPPGTEPEVWAGPLLTTALGALDWERRRWPALYQQVVALYPRCPKDIDARTLAELAGAVEACGNVLVADRLTAERQALAGWVDQVAASSPTLGELAAAWHSGDLTDWDDALAEVRRLWTVRPEALRFAELAARLRLVAPQWMVEIESAEALPDGGEHALRAWRWRQAQTWFDEMVGALDTAALGRKVERCRDRIQHLTRDLVVTSAWLSVARTLDDRKKAALSDWTAALRKIGKGTGKSAAHWQAVAQRAMSEAVDAVPVWVMSIDRALEQFRGGEPLFDVVIVDEASQADVFALPVLSLAQRAVVVGDDQQIGPQIVGVPTDRVQALIGAHLTDVPSAVQFDTESSLYDHAVRRSPERILLTEHFRCVPAIISFSSDHYYDRKIQPLRADLPTGIGAPVHAVFVPGGLREERPDNGSVNVPEAEALVSRVALIVADPAYDGKTLGVVSLLSTSGQAAYLHHRLREEIGPEELERRQLRVGDAYTFQGDERDVVLISMVVAGSGFGAFSKRDYHRRINVAASRARDQLWLFHSVQIGDFSADDARALLLAYCQRPKAAEPVPTEVVTNDFERAVLQRLRERGLNPIPQFRIGAFRIDFVLPAPDGRRLAIECDGDRYQGPDAFAADLRRQAILERVGNATFVRLRSSVFHRDPEVALAPIWDRARELGLT*