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13_1_20cm_3_scaffold_1171_7

Organism: 13_1_20CM_3_Alphaproteobacteria_64_12

partial RP 29 / 55 MC: 1 BSCG 28 / 51 ASCG 5 / 38
Location: comp(5189..5776)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Loktanella vestfoldensis RepID=UPI0003746F26 similarity UNIREF
DB: UNIREF100
  • Identity: 53.7
  • Coverage: 162.0
  • Bit_score: 161
  • Evalue 8.40e-37
RNA polymerase sigma70 factor {ECO:0000313|EMBL:ESZ15024.1}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobi UNIPROT
DB: UniProtKB
  • Identity: 52.4
  • Coverage: 168.0
  • Bit_score: 161
  • Evalue 1.20e-36
ECF subfamily RNA polymerase sigma-24 factor similarity KEGG
DB: KEGG
  • Identity: 48.8
  • Coverage: 168.0
  • Bit_score: 157
  • Evalue 4.50e-36

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Taxonomy

Mesorhizobium sp. L48C026A00 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 588
TTGTCGTTGCGTTGGAAAGAGGCAGAAGCGCCGGTCCGCGCGGCTGACCGCGCCGATCCGGTGAGCCAGCGCTTCAGCGATCAGCTGATCGCGGTTCTGCCGCGGTTGCGCCGGTTTGCCCGGGGCCTGACCGGATCGGCGACCGAGGCCGACGACCTTGTTCAGGCGGCGTGCGAGCGGGCGCTCGCACGTGAGCATCAGTTTCAGGAGGGCACCCGGTTCGACAGCTGGATGTTCCGCATTGTGCAGACGGTTTGGATCGATCAACTCAGGGCCCGCGAGGTCCGCAAGGAAGACAGCGATGTCCCCGAGGAGCGGCTGGGATCGGACGCGCCTGTGCGCACGATCGAGGCGCGGCTCGCGTTGGCCGAGGTGCGGCGCGCCGTGCAGTTTTTGCCGCCCGACCAGAGGACGACCCTGATGCTCGTGACCGTGGAAGGGCTTAGCTACAAGGAAGCCGCCGACGTCGTTGGCGTCCCCGTCGGGACCATCATGAGCCGCCTCGCGCGCGCCCGCATCGCGTTACACCAGCACCTGGAAACCGGCGGCGCAAGCCGCAGGAGCGTAAAGAATGCAGAAGCACAGTGA
PROTEIN sequence
Length: 196
LSLRWKEAEAPVRAADRADPVSQRFSDQLIAVLPRLRRFARGLTGSATEADDLVQAACERALAREHQFQEGTRFDSWMFRIVQTVWIDQLRAREVRKEDSDVPEERLGSDAPVRTIEARLALAEVRRAVQFLPPDQRTTLMLVTVEGLSYKEAADVVGVPVGTIMSRLARARIALHQHLETGGASRRSVKNAEAQ*