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13_1_20cm_3_scaffold_3756_7

Organism: 13_1_20CM_3_Alphaproteobacteria_64_12

partial RP 29 / 55 MC: 1 BSCG 28 / 51 ASCG 5 / 38
Location: comp(4413..5558)

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=1619232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiace UNIPROT
DB: UniProtKB
  • Identity: 55.7
  • Coverage: 221.0
  • Bit_score: 224
  • Evalue 2.90e-55
Pseudouridine synthase n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q21AV9_RHOPB similarity UNIREF
DB: UNIREF100
  • Identity: 53.4
  • Coverage: 208.0
  • Bit_score: 196
  • Evalue 3.50e-47
pseudouridine synthase Rsu similarity KEGG
DB: KEGG
  • Identity: 53.4
  • Coverage: 208.0
  • Bit_score: 196
  • Evalue 1.00e-47

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Taxonomy

Bradyrhizobium sp. LTSP885 → Bradyrhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1146
ATGGCCCGCGATAACGATAAAAACAACGGCCGGCGCGATCGGCCCTCCGGCGCCAAGGGCCGCTCGGGCGCAGCGCGTGGACCTGAAAAGAAATTCGCCAAGCGCGGTTTCGCCGGCAAGAGTGAGGGTGACAAGCGTCCGTACACGCCGCGCGGCGATCGCCCGAAATACAATCGCGATGACCGTGCGCCGCAGGGCGAGCGCGGCGACGCCCGACCGGCGGCACGCTTCCAGCAAAAGAAATTTGGTGACAAGCGGCCCTACGCACCCCGTGACGATCGTGGAGGGAAGCGATCCTACACACCGCGTGGTGAAGGTTTCCGCAAAGACGGCGACCGGCCCCGAGGTGATCGCCCCTACAATGCCAGGCCGCCGCGTGATGGCGACCGAGCGCAAGGCGAGAGAAAATTCGGAGGCGACAAAAAGTTTTCGCGAGCTGGCAACCGGGACGAACGTGGGCCGCGCAAGGAATTTGGCAGCGCGCGGGATCGCGGTCCAGATCGCGGCGAGTCAAAGCCCTGGCATAAGCGCGACGCGGGTTCGGCCGATCATGCCGGACGCAACTCGCGTCCCTCGCGAAGCCGCGGGAACACCGTGGCAGCGAGGAACGTCCGCGCTTTTCGCGCCCCCGCGAGGATCGCCCGCAAGCCCATCGTCCAGAAGGCGAGCGCCCGCATCGCGAGCGGCCGAAATTCGAGCGGCCGCGTCGCGATGGCAACAGCGAGCGTGGGGCGCGCCGTAACGACTGGCAGGAACATCCCCGCAGCGAACCCCGATCGTTCGATCGAAATGCCGATCGGCCTCGACGGGAAAACGAGGACGACAGCAAGATTTTCGCCAAACGTCCGGCGTTCGGCGGCCGCGGCGCCTATCGCGAGCGAGCGAGCGAGGAACGCCGTCCGGCCCGACCGCCACGTGAAAAGAAATCCGGCGAGCGCATCGCCAAGGTGGTCTCGCGGGCAGGGCTTGCCTCGCGCCGTGACGCGGAGGAATGGATCGTGCAGGGCCGCGTCACGGTCAACGGCCGCCTTATCAATTCGCCCGCGCTCGACGTCACCGAGAATGACGTCATCACCGTCGACGGCAAGCCGTTGCCGCCTCGCGAGCGCACGCGGCTGTTCCTGTACCATAAGCCTCGTGGGTTGA
PROTEIN sequence
Length: 382
MARDNDKNNGRRDRPSGAKGRSGAARGPEKKFAKRGFAGKSEGDKRPYTPRGDRPKYNRDDRAPQGERGDARPAARFQQKKFGDKRPYAPRDDRGGKRSYTPRGEGFRKDGDRPRGDRPYNARPPRDGDRAQGERKFGGDKKFSRAGNRDERGPRKEFGSARDRGPDRGESKPWHKRDAGSADHAGRNSRPSRSRGNTVAARNVRAFRAPARIARKPIVQKASARIASGRNSSGRVAMATASVGRAVTTGRNIPAANPDRSIEMPIGLDGKTRTTARFSPNVRRSAAAAPIASERARNAVRPDRHVKRNPASASPRWSRGQGLPRAVTRRNGSCRAASRSTAALSIRPRSTSPRMTSSPSTASRCRLASARGCSCTISLVG*