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13_1_20cm_3_scaffold_5481_8

Organism: 13_1_20CM_3_Alphaproteobacteria_64_12

partial RP 29 / 55 MC: 1 BSCG 28 / 51 ASCG 5 / 38
Location: comp(5212..5514)

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S2 n=1 Tax=Afipia sp. 1NLS2 RepID=D6V9N8_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 97.8
  • Coverage: 90.0
  • Bit_score: 181
  • Evalue 5.30e-43
30S ribosomal protein S2 {ECO:0000256|HAMAP-Rule:MF_00291}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;" UNIPROT
DB: UniProtKB
  • Identity: 97.8
  • Coverage: 90.0
  • Bit_score: 181
  • Evalue 7.40e-43
rpsB; 30S ribosomal protein S2 similarity KEGG
DB: KEGG
  • Identity: 95.6
  • Coverage: 90.0
  • Bit_score: 178
  • Evalue 9.60e-43

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Taxonomy

Afipia sp. 1NLS2 → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 303
ATGGCGCTACCCGATTTCTCTATGCGTCAGCTGCTCGAAGCTGGCGTTCACTTTGGCCATCAATCGCACCGCTGGAATCCGAAAATGGCGGATTACATTTTCGGTGCCCGCAATAACATCCACATCATCGACCTCGCCCAGACCGTGCCGCTGTTGCACCGCGCGCTGCAGGCCGTCAGCGATACCGTCGCCAAGGGCGGCCGTATCCTGTTCGTCGGCACCAAGCGCCAGGCACAGGAAGGCATTGCGGAGGCGGCCAAGCGCTCGGCGCTGCCACTGCTTATACGAAGAAGGAACGCCTGA
PROTEIN sequence
Length: 101
MALPDFSMRQLLEAGVHFGHQSHRWNPKMADYIFGARNNIHIIDLAQTVPLLHRALQAVSDTVAKGGRILFVGTKRQAQEGIAEAAKRSALPLLIRRRNA*