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13_1_20cm_3_scaffold_1725_8

Organism: 13_1_20CM_3_Actinobacteria_68_9

near complete RP 43 / 55 MC: 1 BSCG 46 / 51 MC: 1 ASCG 9 / 38
Location: 7866..8357

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase ECF-type sigma factor n=1 Tax=Symbiobacterium thermophilum (strain T / IAM 14863) RepID=Q67LD3_SYMTH similarity UNIREF
DB: UNIREF100
  • Identity: 37.7
  • Coverage: 154.0
  • Bit_score: 123
  • Evalue 1.60e-25
RNA polymerase ECF-type sigma factor {ECO:0000313|EMBL:BAD41513.1}; TaxID=292459 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Symbiobacteriaceae; Symbiobacterium.;" source="Symbiobacteriu UNIPROT
DB: UniProtKB
  • Identity: 37.7
  • Coverage: 154.0
  • Bit_score: 123
  • Evalue 2.30e-25
RNA polymerase ECF-type sigma factor similarity KEGG
DB: KEGG
  • Identity: 37.7
  • Coverage: 154.0
  • Bit_score: 123
  • Evalue 4.60e-26

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Taxonomy

Symbiobacterium thermophilum → Symbiobacterium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 492
GTGGGGTGTTACGACCGCTATTTCCCGCAGATTTATCGCTTTGCGTATTCCAGAGTTCGGGACCAATCGCTGGCAGAGGACGTGACGTCGGAGGTGTTTTTCAAAGCGCTGAGGAATATCAAGCGGTACACCTACTCGGGCCATCCGTTCTCCTCATGGCTCTATCAGATCACGCTGAACGCGGTCGCCGACCATTACCGCGGCCAGCACGGCGAAGTGGAGCTCGAGGAAGGCGCGGATGTGCCCAGCCGCGGGCCGAGCGTGGTGGATGAGGTGGTGCGACGGGATCGCAGCCGCCGGGTCTGGTCGGCGATCGACCAGCTGCCCCGGCAGCAGCGGGCCGCCATGGTGCTCAAGTTCGGCGAGGACCGGAAGATCGAGGAGATCGCCGTGATCCTGGGCAAGAGCTCCGGGGCGGTCAAGCTTCTGCTGCACCGCGGCGTCGAGCGGCTCCGACGGGAGCTGCCGCAGCTCGAGGCGGAGTTGACCTGA
PROTEIN sequence
Length: 164
VGCYDRYFPQIYRFAYSRVRDQSLAEDVTSEVFFKALRNIKRYTYSGHPFSSWLYQITLNAVADHYRGQHGEVELEEGADVPSRGPSVVDEVVRRDRSRRVWSAIDQLPRQQRAAMVLKFGEDRKIEEIAVILGKSSGAVKLLLHRGVERLRRELPQLEAELT*