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13_1_20cm_3_scaffold_2952_9

Organism: 13_1_20CM_3_Actinobacteria_68_9

near complete RP 43 / 55 MC: 1 BSCG 46 / 51 MC: 1 ASCG 9 / 38
Location: 10900..11499

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=7 Tax=Clostridium thermocellum RepID=A3DDU5_CLOTH similarity UNIREF
DB: UNIREF100
  • Identity: 40.5
  • Coverage: 200.0
  • Bit_score: 144
  • Evalue 1.10e-31
ECF subfamily RNA polymerase sigma-24 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RBG_16_Chloroflexi_64_32_curated UNIPROT
DB: UniProtKB
  • Identity: 43.9
  • Coverage: 187.0
  • Bit_score: 154
  • Evalue 1.50e-34
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 40.5
  • Coverage: 200.0
  • Bit_score: 144
  • Evalue 3.10e-32

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Taxonomy

RBG_16_Chloroflexi_64_32_curated → Chloroflexi → Bacteria

Sequences

DNA sequence
Length: 600
ATGTTTGCGTCTAAAGGCATGAACGACGATCCCGACCTGGTGGGCCGGGCCCGCCGGGGCGATCGGGAGGCGTTTACCCAATTGATCCTGCAATATCAAGTGCCGCTCTACAACATGGCGCTGCGGATGGTCGGCCGACCCGACGACGCCGCCGACATCGCGCAGGAGGCGTTTCTCCGCGCCTGGGAGAAGCTCCGCACCCTGCGGGACGCCCCCTTCAAGGCCTGGCTGTTCCAGATCGCCGCCAACCTCTGCTACGACCATTTTCGTCGCGGCCGGCGCTACGGCGTGATGCCCGACGAAGACCAGACCAGCAACGTCGTTGGGCTTGGGATCGCGACGCCGGATCCCGAGGAGCGCGCCGAGGCGAGCGAACGGAACCGAGTGGTACGTGACAGCATCAAGGCCCTCGACCACGACATGCGGATTGCCCTCATCCTGCGCGACATCAACGGCATGACCTACGACGAGATTGCCGCCGTGCTCCGGGTGCCGCTTGGCACCGTCAAGTCCCGGATCGCCCGCGCGCGTGCGCAGGTCCAGGAGCGCCTGCTTCAACATCCGGAATTGTTTCATCGCGAGGATGTCCATGCCGAATGA
PROTEIN sequence
Length: 200
MFASKGMNDDPDLVGRARRGDREAFTQLILQYQVPLYNMALRMVGRPDDAADIAQEAFLRAWEKLRTLRDAPFKAWLFQIAANLCYDHFRRGRRYGVMPDEDQTSNVVGLGIATPDPEERAEASERNRVVRDSIKALDHDMRIALILRDINGMTYDEIAAVLRVPLGTVKSRIARARAQVQERLLQHPELFHREDVHAE*