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13_1_20cm_3_scaffold_535_1

Organism: 13_1_20CM_3_Actinobacteria_68_9

near complete RP 43 / 55 MC: 1 BSCG 46 / 51 MC: 1 ASCG 9 / 38
Location: 2..1120

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FA01_CONWI similarity UNIREF
DB: UNIREF100
  • Identity: 86.1
  • Coverage: 367.0
  • Bit_score: 618
  • Evalue 6.30e-174
  • rbh
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;" UNIPROT
DB: UniProtKB
  • Identity: 88.3
  • Coverage: 368.0
  • Bit_score: 638
  • Evalue 8.20e-180
RpoD subfamily RNA polymerase sigma-70 subunit similarity KEGG
DB: KEGG
  • Identity: 86.1
  • Coverage: 367.0
  • Bit_score: 618
  • Evalue 1.80e-174

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Taxonomy

uncultured bacterium → Bacteria

Sequences

DNA sequence
Length: 1119
GACGAGAGCGAGCGAATGCTAGTTGCGGAGATTCAAGAGCTTGACGAGGTCAAGGGCCTCGTAGTCAAGGGGCAGCAGGATGGGGTGATCTCCTACGGCGAGGTTGCAACCGCCGTGTCGGAGGTCGACCTCGACGAGTCCGACATCGAGGAGCTCTACGCATACCTCGAGCGTCAAGGCGTCGAGCTCGTCGAGGACGTCGATCCGGCGCAGGCCACCGCGGCCGCGGCCGACGCGGAGTCCGACAAGCGCGGCAAGCGCCGCAAGGCCACGGCGCTCGACCTGAAGCCGGACATGACCACCGACTCGCTGCAGCTCTTCCTCAAGGACATCGGCAAGGTTCGCCTGCTGACCGCGCAGGAGGAGGTGGAGCTTGCCAAGCGGATCGAGCGCGGCGACCTCGAGGCGAAACAGAAGATGGTCGAGTCGAACCTGCGTCTGGTCGTCTCGATCGCCAAGAACTACCGCAACCAGGGCCTGCCCTTCCTCGACCTGATCCAGGAGGGGACGCTCGGCCTGGTGCGGGCGGCGGAGAAGTTCGACTATCGCAAGGGGTTCAAGTTCTCGACCTACGCGACCTGGTGGATCCGCCAGGCGATTGCCCGGGCGCTCGCCGACAAGGCGCGCACTATCCGGATCCCGGTCCACGTGGTCGAGAAGCTGAACAAGATTGGCCGCGCGGAGCGCAAGCTGGTCACCGAGCTCGGCCGGGAGCCGACGCCGGACGAGATCGCGGAGGTCACCGGGATCGATCCCGAGGAGGTCGATCAGATCAAGCGCTCGGCACAGGCCCCGGTCTCGCTGGAGAAGCCCGTGGGCGACGAGGAGGAGTCCGAGTTCGGCCAGTTCATCGCCGACGAGAAGGCCGAGTCGCCGTTCGAGCGCGCTGCCGACCTGCTCACCAAGGAGGCGCTGCGCGAGGCGCTCGAGAATCTCTCCTACCGCGAGCGGCGCGTGCTCGAGCTCCGCTACGGACTGGGCGGCGAGCACCCGCGCACCCTGGACGAGGTCGGCCGAACGTTCAACGTTACGCGCGAGCGAATCCGCCAAATCGAGAATCAGTCCCTGAAGAAGCTTCAGTCGCTCGCTGAGGCTCAGAAGCTCCGAGAAGTTGCATAG
PROTEIN sequence
Length: 373
DESERMLVAEIQELDEVKGLVVKGQQDGVISYGEVATAVSEVDLDESDIEELYAYLERQGVELVEDVDPAQATAAAADAESDKRGKRRKATALDLKPDMTTDSLQLFLKDIGKVRLLTAQEEVELAKRIERGDLEAKQKMVESNLRLVVSIAKNYRNQGLPFLDLIQEGTLGLVRAAEKFDYRKGFKFSTYATWWIRQAIARALADKARTIRIPVHVVEKLNKIGRAERKLVTELGREPTPDEIAEVTGIDPEEVDQIKRSAQAPVSLEKPVGDEEESEFGQFIADEKAESPFERAADLLTKEALREALENLSYRERRVLELRYGLGGEHPRTLDEVGRTFNVTRERIRQIENQSLKKLQSLAEAQKLREVA*