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13_1_20cm_3_scaffold_5994_4

Organism: 13_1_20CM_3_Actinobacteria_68_9

near complete RP 43 / 55 MC: 1 BSCG 46 / 51 MC: 1 ASCG 9 / 38
Location: 2885..3451

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9B1X2_HERA2 similarity UNIREF
DB: UNIREF100
  • Identity: 40.5
  • Coverage: 173.0
  • Bit_score: 139
  • Evalue 4.30e-30
putative RNA polymerase ECF-type sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=CG_Anaero_02 UNIPROT
DB: UniProtKB
  • Identity: 40.5
  • Coverage: 190.0
  • Bit_score: 143
  • Evalue 3.20e-31
ECF subfamily RNA polymerase sigma-24 factor similarity KEGG
DB: KEGG
  • Identity: 40.5
  • Coverage: 173.0
  • Bit_score: 139
  • Evalue 1.20e-30

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Taxonomy

CG_Anaero_02 → Anaerolineae → Chloroflexi → Bacteria

Sequences

DNA sequence
Length: 567
GTGCGCGCACTGGGAAGGCCGGCGGGCGACGATGATCGCCCGCTCATCGAGCGGGTGCGAAAAGGGGACCAGGACGCCGCCCGTACCCTCTACGAGCGCTACTTCGACCGTATCTACAACTATGTCTATGCCCGCCTCGGTCGGGCGGAGGACGCGGAGGATCTGGCCATCGACACCATGACCCGCAGCCTTACCCGTCTCGATCAGTTCCAGGACCAGGGCGTCGCCTTTTCCTCCTGGGTCTACAAAATCGCGCACAACGCCACCATCGATCACTACCGGCGCCACGGCAAGGTGACCCTCGTCTCGCTGGAGCAGGCGACGCTTCCGCAATCCGCCGATCCCTCCGAGCTGGCCGTTGAACAGCTCTCCAACGAGGACCTGCGTATCGCGCTTCGTGCTCTGACCGACGAACAGCAACAGGTCCTGATCCTGCGATTCTTCCAGGACCTGACCGCCGCTCAAGTGGCCGGCATCATGGGCAAATCCGTGGGTGCCGTGCAGGCGCTGCAGCATCGCGCGCTGGGTTCGCTGGAGCGTGCCTTGCAGGGGAGGGCTGTCAATTGA
PROTEIN sequence
Length: 189
VRALGRPAGDDDRPLIERVRKGDQDAARTLYERYFDRIYNYVYARLGRAEDAEDLAIDTMTRSLTRLDQFQDQGVAFSSWVYKIAHNATIDHYRRHGKVTLVSLEQATLPQSADPSELAVEQLSNEDLRIALRALTDEQQQVLILRFFQDLTAAQVAGIMGKSVGAVQALQHRALGSLERALQGRAVN*