ggKbase home page

You do not have permission to do that.

Please email help@ggkbase.berkeley.edu for help.

13_1_20cm_3_scaffold_7868_3

Organism: 13_1_20CM_3_Actinobacteria_68_9

near complete RP 43 / 55 MC: 1 BSCG 46 / 51 MC: 1 ASCG 9 / 38
Location: 1920..2660

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=actinobacterium SCGC AAA278-I18 RepID=UPI0003814F33 similarity UNIREF
DB: UNIREF100
  • Identity: 57.5
  • Coverage: 240.0
  • Bit_score: 280
  • Evalue 1.60e-72
Amino acid/amide ABC transporter substrate-binding protein, HAAT family {ECO:0000313|EMBL:EJX36473.1}; Flags: Precursor;; TaxID=913338 species="Bacteria; Actinobacteria.;" source="actinobacterium SCGC UNIPROT
DB: UniProtKB
  • Identity: 56.7
  • Coverage: 238.0
  • Bit_score: 271
  • Evalue 1.00e-69
amino acid ABC transporter substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 44.4
  • Coverage: 243.0
  • Bit_score: 196
  • Evalue 1.10e-47

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

actinobacterium SCGC AAA027-L06 → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 741
ATGACAAGGCGCATTACCGCGCTCGCAGTCGCAGCCGTAACCGTCATCGCGGGAGCGGCGGCGTGCAGCAAGTCCGGCAGCAGCGGCAATACCAACAAGACGCTCGTCGTCGGCGTCGACCTGCCCTTCCAGGGCGCGTCGGCGGACACTTCCAACGCGACGTACAACGCGATGCAGATCTATCTCGACTCGGTCGGTGGCAAGGCCGGCAACTACAAGGTCCAGTTGAAGAAGTACGACGACTCGACCGCCGCCGCCGGTAAGTGGGACGACGCCACCTGCACCAAGAACGCGGACGCGCACGTGGCCAACGCCGACGAGGTAGCGGTCATGGGCACCTACAACTCGGGCTGCGCCAAGCTCGAGGTGCCGAAGCTCAACCAGGACACCACCGGCCCGCTGCTGATGATCTCGCACGCGAACACCAACCCGGGCCTGACCAAGTCCTGGGACGCCAACGAGCCGGACAAGTACTACCCGGCCGGCAAGCGCAACTACGCGCGGGTCATCACCACCGACGACCACCAGGGCACCGCGGCCGCGCGCTTCGCCGCCAAGGACCTGAGCCTGAAGAAGTGCTACGTCCTCAACGACCAGGAGACCTACGGCCAGGGCGTGGCCAAGGCCTTCAAGGACGAGGCGGCCAAGCAGGGCATCACGATCCTGGGTGAGCAGGGCTGGGACGCGAAGCAGCCGAACTACACCGCGCTGTTCAACAGCATCANNNNNNNGTCAAGCTGA
PROTEIN sequence
Length: 247
MTRRITALAVAAVTVIAGAAACSKSGSSGNTNKTLVVGVDLPFQGASADTSNATYNAMQIYLDSVGGKAGNYKVQLKKYDDSTAAAGKWDDATCTKNADAHVANADEVAVMGTYNSGCAKLEVPKLNQDTTGPLLMISHANTNPGLTKSWDANEPDKYYPAGKRNYARVITTDDHQGTAAARFAAKDLSLKKCYVLNDQETYGQGVAKAFKDEAAKQGITILGEQGWDAKQPNYTALFNSIXXXSS*