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13_1_20cm_3_scaffold_820_19

Organism: 13_1_20CM_3_Actinobacteria_68_9

near complete RP 43 / 55 MC: 1 BSCG 46 / 51 MC: 1 ASCG 9 / 38
Location: comp(12949..14070)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma24 factor n=1 Tax=Amycolatopsis benzoatilytica RepID=UPI00037AAC3B similarity UNIREF
DB: UNIREF100
  • Identity: 62.9
  • Coverage: 380.0
  • Bit_score: 449
  • Evalue 3.90e-123
RNA polymerase subunit sigma-24 {ECO:0000313|EMBL:EWT02150.1}; TaxID=1386089 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium oryzae NRR UNIPROT
DB: UniProtKB
  • Identity: 65.7
  • Coverage: 373.0
  • Bit_score: 465
  • Evalue 5.60e-128
putative ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 62.2
  • Coverage: 368.0
  • Bit_score: 440
  • Evalue 3.90e-121

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Taxonomy

Intrasporangium oryzae → Intrasporangium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1122
TTGCAGGAGGCGTTGCTCGCGGCAGCGAGGCGCTGGCCCCGGGACGGGGTGCCGGAGCATCCGCACGCGTGGCTCCTGCAGGCGGCGACGCGGCGGTTGATCGACCAGTACCGCAGCGAGCGCTCGCGCCGCGAGCGGGAGGCCGTCGCGACGGCGCAGGAGTGCCAGTCACCAGCCGTGTCCGACCGGGACGACACGCTCGCCGTGCTGTTCATGTGCTGCCATCCGGCGTTGACGCCGGCGTCGGCGATCGCCCTCACTCTCCGCGCGGTCGGGGGGCTGACGACCGTGGAGATCGCGCGCGCGTTCCTCGTCGACGAGGCGACGATGGCGCAGCGGATCTCCCGGGCGAAGCAGCGGATCAAAGCGTCCGGCGCCACCTTCCGAATGCCGACGCCCGACGAGCGGCCGGCTGCCGTGCGGAGCGTGCTGCACGTGCTCTACCTGATCTTCAACGAGGGCTACACCGCGCAGCGGGCGGAGCTGTCCGACGAGGGCATCCGGCTCGTGCGCATGACGAGGCGCTTGCTCCCCGACGATCCGGAGGTGACCGGGTTGCTCGCGCTGATGCTCCTGCTCGACGCGCGACGCGCCGCGCGGCTCGACAACGAGGGCGACCTCGTCCCGCTCAGCGAGCAGGATCGTGCGCGCTGGGACGGCGAACCGGCCGCCGAGGGTCTCGCGCTCCTCGACGAGGCGATCCGCGCGGGCGCCGTCGGCGAGTACCAGCTTCAGGCCGCGATCGCCGCGATCCACAACCGCGCGGCGCGCGCGGAGGACACCGACTGGCCGCAGATCAACGCCCTGTACGGGCTGCTGGAGCAGCTGAGCGGAAACCCGATCGTGACCCTCAACCGCGCAGTCGCCGCAGGGATGGCGGACGGGCCCGCGGCGGGTCTCGCCTTGCTGGACGGCCTCGACGAGCGCCTGCCGGACAACCACCGCGTCGATGCCGTTCGTGCGCACCTGCTGGAGATGGCCGGCGACGTCGAGGGTGCGGTGGCGTCTTATCGAGCGGCCGCGCGCCGCACGACGAATCTCGCCGAGCAGCGCTATCTGACGGCGCGTGCCGCGGGGCTTGCGGCTAGCCGTGCTCCTCGTGCTGGGGAAGAGCGTCCGTGA
PROTEIN sequence
Length: 374
LQEALLAAARRWPRDGVPEHPHAWLLQAATRRLIDQYRSERSRREREAVATAQECQSPAVSDRDDTLAVLFMCCHPALTPASAIALTLRAVGGLTTVEIARAFLVDEATMAQRISRAKQRIKASGATFRMPTPDERPAAVRSVLHVLYLIFNEGYTAQRAELSDEGIRLVRMTRRLLPDDPEVTGLLALMLLLDARRAARLDNEGDLVPLSEQDRARWDGEPAAEGLALLDEAIRAGAVGEYQLQAAIAAIHNRAARAEDTDWPQINALYGLLEQLSGNPIVTLNRAVAAGMADGPAAGLALLDGLDERLPDNHRVDAVRAHLLEMAGDVEGAVASYRAAARRTTNLAEQRYLTARAAGLAASRAPRAGEERP*