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13_1_20cm_3_scaffold_1294_3

Organism: 13_1_20CM_3_Actinobacteria_70_7

partial RP 34 / 55 MC: 5 BSCG 31 / 51 MC: 3 ASCG 8 / 38 MC: 1
Location: comp(1189..2166)

Top 3 Functional Annotations

Value Algorithm Source
Squalene synthase HpnD n=1 Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7Q020_CATAD similarity UNIREF
DB: UNIREF100
  • Identity: 84.7
  • Coverage: 288.0
  • Bit_score: 486
  • Evalue 1.90e-134
  • rbh
Squalene synthase HpnD {ECO:0000313|EMBL:ACU75513.1}; TaxID=479433 species="Bacteria; Actinobacteria; Catenulisporales; Catenulisporaceae; Catenulispora.;" source="Catenulispora acidiphila (strain DSM UNIPROT
DB: UniProtKB
  • Identity: 84.7
  • Coverage: 288.0
  • Bit_score: 486
  • Evalue 2.70e-134
squalene synthase similarity KEGG
DB: KEGG
  • Identity: 84.7
  • Coverage: 288.0
  • Bit_score: 486
  • Evalue 5.40e-135
  • rbh

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Taxonomy

Catenulispora acidiphila → Catenulispora → Catenulisporales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 978
ATGGACATGCAAGACGGGCTCAGCCGATCTGAGCCGTCGGCGCAGCCGACACCTGTAACGAAAAAGGTGCTCAGCCGATCTGAGCCGTCGGCACAGCCGACATTCACCATAAAAGCGGCCTACGACCATTGCGAACGGGTGGTCCGCGCCCGGGCCCGCAACTTCGCCTACGGGATCCGCCTGCTGCCGACCGCGAAACGGCAGGCGCTGTCCGCCGTCTACGCCTTCGCCCGCCGCGTCGACGACATCGGCGACGGCACCGCCCCGGCCGGGGAGCGGCTGGCCCAGCTCGGGACGGCGCGCGCCGACCTGCACGCCGTCGCCCGGGACCCGAACGGGCGCCCCGAGGACCCGGTGCTGGTGGCGCTGGCCGACGCCGCGAGCCGGCACCCGATCCCGCTGGGCGCCTTCGACGAGCTCATCGACGGCTGCGAGGCCGACGTCCGCGGCACCGACTACGCCACCGTGGACGAGCTGACCCACTACTGCCGGTGCGTCGCCGGGTCCATCGGCCGGCTGTCGCTCGGCGTCTACGGCGTCGATCCCGCGCGGCTGGAGGAAGCATCGCACTACGCCGACTCCCTCGGCGTGGCGCTCCAGCTCACGAACATCCTGCGGGACATCCGCGAGGACGGCCTGATGGGCCGCGTCTACCTGCCGGCCGACGAACTGGTCCGGCACGGCTGCACGCTGAAGCTGGACGAGCACGGCCGCTTCCTCGACGATCCTCCCAACCTGGCGGCCCTGATGCAGGACCAGGCGGCGCAAGCCAGGGCTTGGTACGACACCGGACTGCGGCTGCTGCCGCTGCTGGACCGGCGCAGCGCCGCGTGCACGGCGGCGATGGCCGGGATCTACCGCCGGCTGCTGGTCCGCATCGCCGAGCAGCCGATCAGCGCCCTGAACACCCGGATGTCGCTGCCGGCGTGGGAGAAGGGCGTGGTCGCGGCCCGTGCCCTGGCGGGGCTCAAGCCATGA
PROTEIN sequence
Length: 326
MDMQDGLSRSEPSAQPTPVTKKVLSRSEPSAQPTFTIKAAYDHCERVVRARARNFAYGIRLLPTAKRQALSAVYAFARRVDDIGDGTAPAGERLAQLGTARADLHAVARDPNGRPEDPVLVALADAASRHPIPLGAFDELIDGCEADVRGTDYATVDELTHYCRCVAGSIGRLSLGVYGVDPARLEEASHYADSLGVALQLTNILRDIREDGLMGRVYLPADELVRHGCTLKLDEHGRFLDDPPNLAALMQDQAAQARAWYDTGLRLLPLLDRRSAACTAAMAGIYRRLLVRIAEQPISALNTRMSLPAWEKGVVAARALAGLKP*