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13_1_20cm_3_scaffold_1653_4

Organism: 13_1_20CM_3_Actinobacteria_70_7

partial RP 34 / 55 MC: 5 BSCG 31 / 51 MC: 3 ASCG 8 / 38 MC: 1
Location: comp(4774..5628)

Top 3 Functional Annotations

Value Algorithm Source
XRE family transcriptional regulator n=1 Tax=Frankia sp. BMG5.12 RepID=UPI00037A44BE similarity UNIREF
DB: UNIREF100
  • Identity: 44.6
  • Coverage: 278.0
  • Bit_score: 225
  • Evalue 5.30e-56
Helix-turn-helix domain protein {ECO:0000313|EMBL:ABW10363.1}; TaxID=298653 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EAN1pec).;" UNIPROT
DB: UniProtKB
  • Identity: 43.9
  • Coverage: 278.0
  • Bit_score: 223
  • Evalue 3.70e-55
helix-turn-helix domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 43.9
  • Coverage: 278.0
  • Bit_score: 223
  • Evalue 7.40e-56

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Taxonomy

Frankia sp. EAN1pec → Frankia → Frankiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 855
GTGGTTGAAGCGGTCAGTCCGGTAGTGCGGGGGCGTCGGCTCGCGGCCGCCCTCCGGGGCCTGCGCCTCGCCTCGGGCCGGACCATCGAAGAGGTCGCCGTACACCTCGAGTGCTCGGCGGCGAAGATCAGCCGGATCGAGAACGGCCTGGTCAACGTCCGCATCCAGGACGCCCGCGAACTGCTCGACCTCTACGGGGTGCAGAGCGCCGACCGCGAGGACCTGCTCGATCTGGTCCGCCAGGCGAAGGGCCGGGGCTGGTGGCACCCCTATGCCGACCTGATGGCCGACGGTTTCGACCGCGTCATCGGCTTCGAGGCGGAGGCCACCACGATCCGGATGCTCGATGCGCGGCTGATCCCCGGGCTGCTGCAGACTCGGCAGTACGCGACCGCGTTGATGTCCTCACGGCGCGACGTGTCGGCCGCCACGATCGAGCGGCTCGTGCGGCTGCGCATGGAACGCCAGTCCGTCCTGCACCGTGCTGACGCACCCTGGTTCCACCTGCTCCTCGACGAGGCCGCGCTACGCAGGCGGATCGGGCCGCCGAGCGTAATGCGCCACCAGTATTCACGGCTCATCGACGAGGCGGGCACCGCGGCCCTGACCCTGCAGGTGCTGCCGCTGACGGCGGAGCCGCACCAGGCCCCCGGATACTCCTTCACCATCTTCGGGTTCGGCGATCCGGCCGACCCGGAGGTCGTCTTCGAGGAGCGGTTGGAGGGGACGAGTTTCGAGGAGTCGGTCGAGACGGTCGGCCGCTACCGCGTCGCCTTCGAGCATGCCGCGTCGTGCGCGCTGGACCCGGCCGCCTCGCTGGACTTCCTCGCGGAGATTGCTGAGGGGTGCCGTTGA
PROTEIN sequence
Length: 285
VVEAVSPVVRGRRLAAALRGLRLASGRTIEEVAVHLECSAAKISRIENGLVNVRIQDARELLDLYGVQSADREDLLDLVRQAKGRGWWHPYADLMADGFDRVIGFEAEATTIRMLDARLIPGLLQTRQYATALMSSRRDVSAATIERLVRLRMERQSVLHRADAPWFHLLLDEAALRRRIGPPSVMRHQYSRLIDEAGTAALTLQVLPLTAEPHQAPGYSFTIFGFGDPADPEVVFEERLEGTSFEESVETVGRYRVAFEHAASCALDPAASLDFLAEIAEGCR*