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13_1_20cm_3_scaffold_256_9

Organism: 13_1_20CM_3_Actinobacteria_70_7

partial RP 34 / 55 MC: 5 BSCG 31 / 51 MC: 3 ASCG 8 / 38 MC: 1
Location: 16099..16632

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7QIZ2_CATAD similarity UNIREF
DB: UNIREF100
  • Identity: 86.4
  • Coverage: 176.0
  • Bit_score: 300
  • Evalue 1.10e-78
  • rbh
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ACU77042.1}; TaxID=479433 species="Bacteria; Actinobacteria; Catenulisporales; Catenulisporaceae; Catenulispora.;" source="Catenulispo UNIPROT
DB: UniProtKB
  • Identity: 85.8
  • Coverage: 176.0
  • Bit_score: 299
  • Evalue 4.30e-78
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 85.8
  • Coverage: 176.0
  • Bit_score: 299
  • Evalue 8.60e-79

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Taxonomy

Catenulispora acidiphila → Catenulispora → Catenulisporales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 534
GTGAGATCTCTCAGGAAAGGCACCAGCCCGGAGCTCCAAGAGGAGTTCAGGGCCTTCGTCACAGGAAGCCAGGGCCACCTGAGGCGCTCGGCCTACGTGCTGTGCGGTGACTGGCACCTCGCCGAGGACCTGGTTCAGACCGCGTACCAGCGGATCTTCCGGTCGTGGCACCGGGTGCGGGTGATCGACATGCCCGATGCCTACGCGCGACGTGTCGTCTACCACTGCTTCCTCGACAGCCGCAAGCGGCAGCGCGAGGTGGCGTCGCTGGAGACGCTGGTCGACCGGCCGGCCGTGGAGGTCGACACCGCGGCGCGGCTGACGATCCTGGCCGCCCTGGCCGCGTTGGCGCCGCGTACGCGTGCCGTCGTCGCTCTTCGCTACTGGGAGGACCAGAGCGTCGAACAGACCGCGGCCGTGCTCGGAATCAGCGCGGGCACGGTCAAGAGCATGTCCGCTCGCGGGCTGGCGCAGCTGCGCGAGCGGCTGGGCGACTTCGCGGCCCTGCTTCCCGACTCCGTAGAAAACAAGTGA
PROTEIN sequence
Length: 178
VRSLRKGTSPELQEEFRAFVTGSQGHLRRSAYVLCGDWHLAEDLVQTAYQRIFRSWHRVRVIDMPDAYARRVVYHCFLDSRKRQREVASLETLVDRPAVEVDTAARLTILAALAALAPRTRAVVALRYWEDQSVEQTAAVLGISAGTVKSMSARGLAQLRERLGDFAALLPDSVENK*