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13_1_20cm_3_scaffold_2672_11

Organism: 13_1_20CM_3_Actinobacteria_70_7

partial RP 34 / 55 MC: 5 BSCG 31 / 51 MC: 3 ASCG 8 / 38 MC: 1
Location: 6466..7797

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7QKG0_CATAD similarity UNIREF
DB: UNIREF100
  • Identity: 81.9
  • Coverage: 452.0
  • Bit_score: 701
  • Evalue 6.70e-199
  • rbh
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=479433 species="Bacteria; Actinobacteria; Catenulisporales; Catenulisporaceae; Catenulispora.;" source="Catenulispora acidiphila (str UNIPROT
DB: UniProtKB
  • Identity: 81.9
  • Coverage: 452.0
  • Bit_score: 701
  • Evalue 9.40e-199
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 81.9
  • Coverage: 452.0
  • Bit_score: 701
  • Evalue 1.90e-199
  • rbh

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Taxonomy

Catenulispora acidiphila → Catenulispora → Catenulisporales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1332
ATGGCGGAGAAGTCCCAGGCGGTCGCGACGATCGAGGCGGTCTGGCGGATGGAGGCGGCCCGGGTGGTGGCGACCCTGGCCCGCTACACCGGCGATCTGGGCCTGGCCGAGGAACTGGCGCAGGACGCGCTGGTCGCGGCGCTGGAGCAGTGGCCGGCCGAGGGGGTGCCGGCCCGGCCCGGCGGCTGGCTGACAGCGGTCGGCAAGCGGCGCGCCGTGGACTACTTCCGGCGCGCCGAGACACTGCGCCGCAAGGTCGGCGAGCTGGGCCGGGAGCTGGAGATGGACGGTCAGGGCTACGAGATCGACCTCGACGCCCTCGACAGCGACGCCGCCATCGACGACGACCTGCTGCGCCTGGTCTTCACCGCCTGCCATCCGGTGTTGTCCGCCGAAGCGCGCGTGGCGCTCACGCTGCGCGTCCTCGGCGGCCTGTCCACGCCGGAGATCGCGCGTGCGTTCCTGATTTCGGAATCGACGGCTGCGCAAAGGATCGTGCGGGCCAAGCGCACGCTGGCCGATGCCGGCATAGTGTTCGAGGCTCCCGACGGCGCCGAGCGGCGGCGGCGTCTGGAGTCGGTGCTCGAAGTCGTCTACTTGATCTTCAATGAGGGCTACGCGGCCACCGCCGGAGACGACTGGCTGCGCCCCGGCCTGTGCGAGGAAGCGCTGCGGCTGGGGCGGGTGCTGGTCGGCCTGATGCCGGACGAGCCGGAAGTCCACGCGCTGGTGGCGTTGATGGAGATCCAGGATTCGCGCCGCCACGCCCGTACCGACCCGGACGGGGAACCGGTGCTGCTGCTGGATCAGGACCGGGCGAAGTGGGACTGGTCGCAGATCGAGCGGGGACTGAAGGCGTTGGCTCGGGCCGATGAGGCTTTCGCGGCGCGGGCTGACGGCGATACGCGCTCAGGCGATCGGCCGACCGAACCCGGCGCCTACCACCTCCAAGCCGCCCTGGCCGCCTGCCACGCCCGCGCCCGCAACGCCGAGGCCACCGACTGGCGCCTCATCGCCGACCTCTACGACCGCCTGGTCCAGCAGACCCGATCCCCGGTCGTCGAACTCAACCGCGCGGTCGCCGTCGGGATGGCCGAGGGCCCGGCGGCGGGTCTGGAAGTCACCGACGCACTGGTCGGCCTGCGGGCCATGCAGGGCTACCACCTGCTGCCCAGCGTGCGCGGCGATCTGCTGGTCCGGCTTGGGCGGCACACCGAGGCGCGGTCCGAGTTCGAGCGCGCCGCCGAGCTCACCGCCAACACGCGGGAGCGCGCGCTTCTGCTGGCGCGTGCCGCCGCGTGCGACGCGAGTGCGGCTGAATCGGAGAGCTGA
PROTEIN sequence
Length: 444
MAEKSQAVATIEAVWRMEAARVVATLARYTGDLGLAEELAQDALVAALEQWPAEGVPARPGGWLTAVGKRRAVDYFRRAETLRRKVGELGRELEMDGQGYEIDLDALDSDAAIDDDLLRLVFTACHPVLSAEARVALTLRVLGGLSTPEIARAFLISESTAAQRIVRAKRTLADAGIVFEAPDGAERRRRLESVLEVVYLIFNEGYAATAGDDWLRPGLCEEALRLGRVLVGLMPDEPEVHALVALMEIQDSRRHARTDPDGEPVLLLDQDRAKWDWSQIERGLKALARADEAFAARADGDTRSGDRPTEPGAYHLQAALAACHARARNAEATDWRLIADLYDRLVQQTRSPVVELNRAVAVGMAEGPAAGLEVTDALVGLRAMQGYHLLPSVRGDLLVRLGRHTEARSEFERAAELTANTRERALLLARAAACDASAAESES*