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13_1_20cm_3_scaffold_2672_23

Organism: 13_1_20CM_3_Actinobacteria_70_7

partial RP 34 / 55 MC: 5 BSCG 31 / 51 MC: 3 ASCG 8 / 38 MC: 1
Location: comp(17027..17722)

Top 3 Functional Annotations

Value Algorithm Source
Putative transmembrane anti-sigma factor n=1 Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7QKH1_CATAD similarity UNIREF
DB: UNIREF100
  • Identity: 59.0
  • Coverage: 227.0
  • Bit_score: 245
  • Evalue 6.90e-62
Putative transmembrane anti-sigma factor {ECO:0000313|EMBL:ACU77070.1}; TaxID=479433 species="Bacteria; Actinobacteria; Catenulisporales; Catenulisporaceae; Catenulispora.;" source="Catenulispora acid UNIPROT
DB: UniProtKB
  • Identity: 59.0
  • Coverage: 227.0
  • Bit_score: 245
  • Evalue 9.60e-62
transmembrane anti-sigma factor similarity KEGG
DB: KEGG
  • Identity: 59.0
  • Coverage: 227.0
  • Bit_score: 245
  • Evalue 1.90e-62

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Taxonomy

Catenulispora acidiphila → Catenulispora → Catenulisporales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 696
CGCGCTGCGCGCGCTGCGGACCGCGTTCGAGGAGCGGGGGCTCAAGCCGTGAACCGGGCGCAGTGCGACAACGAGGAGCTCCGGATCTCGGTCGGGGCGCTGGCCCTGGGGGCCCTGGACGCCGACGAGGCCCGGCAGGTGCGCCGGCACCTGGCCGTGTGCCCGGAATGCCAAGACGAGTACACGTCCTTCCTGGGCGTGAAGCGGATCATGGACGTCGGCCTGGTGGACGCCCCGGTGCGGGAGGAGCCGAGGCCACGCAAGCGGCCGGTGTTCGCCACACCGCTGCGCCGCAGGCTGGCGATCGGAACAGCGACCGGTGTCGCCGCGCTGGGCCTGCTGCTCGGCGGTTTCTCAGGCGGTTTCCTGGCCGGCCGCGGCGGCGACTCCACCACCCCGACCGACGTCGCCTTGCCCGTGGTCACCCAGGGCGGCGTCACCGCCGCCATCTCCTACCACCATGTCGGCTGGGGCACCTGGGTCGACGCGAAGATGAGCGGTGCGCCGGCCGACGTCGTGTGCACGCTCTACGTCTACGACAAGCGCCAGCAGGCGATCCAGCTCTCCAGCTGGAAGTCGGTTCCCGGCAAGGTGATCGAGATCCCGGCCGCCACCTCGCTGGCCCCGGACCAGATCGACCACTTCGAGGTGCGGGTCGACAACCGGGGCTACGACATCAGTGTCCCGATGTCCTGA
PROTEIN sequence
Length: 232
RAARAADRVRGAGAQAVNRAQCDNEELRISVGALALGALDADEARQVRRHLAVCPECQDEYTSFLGVKRIMDVGLVDAPVREEPRPRKRPVFATPLRRRLAIGTATGVAALGLLLGGFSGGFLAGRGGDSTTPTDVALPVVTQGGVTAAISYHHVGWGTWVDAKMSGAPADVVCTLYVYDKRQQAIQLSSWKSVPGKVIEIPAATSLAPDQIDHFEVRVDNRGYDISVPMS*