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13_1_20cm_3_scaffold_517_3

Organism: 13_1_20CM_3_Actinobacteria_70_7

partial RP 34 / 55 MC: 5 BSCG 31 / 51 MC: 3 ASCG 8 / 38 MC: 1
Location: comp(1431..1946)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7QJ80_CATAD similarity UNIREF
DB: UNIREF100
  • Identity: 82.4
  • Coverage: 170.0
  • Bit_score: 272
  • Evalue 2.30e-70
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ACU69222.1}; TaxID=479433 species="Bacteria; Actinobacteria; Catenulisporales; Catenulisporaceae; Catenulispora.;" source="Catenulispo UNIPROT
DB: UniProtKB
  • Identity: 82.4
  • Coverage: 170.0
  • Bit_score: 272
  • Evalue 3.20e-70
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 82.4
  • Coverage: 170.0
  • Bit_score: 272
  • Evalue 6.40e-71

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Taxonomy

Catenulispora acidiphila → Catenulispora → Catenulisporales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 516
GTGCGGGGTGACAAGAGCGGCTATGAGACCGAGTTCCGCGAATACATGGTCAGCAGATGGGGGAACCTGGTCCGCTTCGCGTACGGGCTGACCGGCGACCGCGGCCACGCCGAGGACCTGGCGCAGACCGCGCTGGCGAAGGCGTACGCGTCGTGGCCGCGCGTGCGCCGCGCCGAGGACCCGGACGCCTACGTCCGCAGGATCCTGATCAACGCCAACCACGGCCGCTTCCGCAAGCGGCGGGTCGAGGAGAACAGCGGCGAGGCGCCGACCGAGCCGGCCGTCGCCGACGGCACCGCCGCCGTCGACGAGCGCGCGGCGCTCATGGCGGCGCTGATGGAGCTGCCGCCGAAGCAGCGCGCGGTGGTGGTGCTGCGCTACTGGGACGGCCTGACGGAGACGCAGGCGGCGGCGGTCCTCGGCTGCTCGGTCGGAAATGTGAAGAGCCAGGCGTCTCGGGCCCTGGCGAAGCTTCGGGACAACGTCCAGCTTCAGGACGGGAGTGTGACATTGTGA
PROTEIN sequence
Length: 172
VRGDKSGYETEFREYMVSRWGNLVRFAYGLTGDRGHAEDLAQTALAKAYASWPRVRRAEDPDAYVRRILINANHGRFRKRRVEENSGEAPTEPAVADGTAAVDERAALMAALMELPPKQRAVVVLRYWDGLTETQAAAVLGCSVGNVKSQASRALAKLRDNVQLQDGSVTL*