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13_1_20cm_3_scaffold_8263_2

Organism: 13_1_20CM_3_Actinobacteria_70_7

partial RP 34 / 55 MC: 5 BSCG 31 / 51 MC: 3 ASCG 8 / 38 MC: 1
Location: 1230..1772

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Kitasatospora setae (strain ATCC 33774 / DSM 43861 / JCM 3304 / KCC A-0304 / NBRC 14216 / KM-6054) RepID=E4NKC9_KITSK similarity UNIREF
DB: UNIREF100
  • Identity: 45.8
  • Coverage: 177.0
  • Bit_score: 146
  • Evalue 2.00e-32
RNA polymerase sigma-70 factor, ECF subfamily {ECO:0000313|EMBL:EWM13364.1}; TaxID=345341 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria sp. 7 UNIPROT
DB: UniProtKB
  • Identity: 51.6
  • Coverage: 157.0
  • Bit_score: 151
  • Evalue 1.10e-33
RNA polymerase, sigma-24 subunit, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 50.0
  • Coverage: 160.0
  • Bit_score: 150
  • Evalue 5.10e-34

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Taxonomy

Kutzneria sp. 744 → Kutzneria → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 543
ATGACCCCTGCATCGCCTGCCCCCGTTGTCCCGCAGTTGACCGCCCACCGCATGCGCATCATCTACGACCTGCACTCCGCCGCCCTGCTCAGCACCCTGCTCAACTGGACCTACGGGGACTGGCAGGCGGCCGAGGACCTGATGCAGGAGACGATGGTGCGTGCCTGGCAGCACCTCGACACGCTCGACGCGGACCCGCGGACCCTGCGGCCGTGGCTGTTCACCGTCGCCCGGCGGATCGCGATCGACCGCTTCCGGGCCCGCACGGCGCGGCCGCCGGAGACCGAGCCGGAACCGCTGGAGGAGACCGCCGCGCCCGGCGAGCCCTTCGAGCGGCTGCTCGACCGGGCCGCCGTGGTCAGCGCGCTGCGCGAGGTCGACGAGCTGCATCGCAACGCCTTGATCCATGTCTACCTGATGGACCGCACCGTACCCGAGGCCGCCGCGGTGCTCGGGGTGCCGGAAGGAACCGTCAAGTCCCGGATACACCACGGTCTGCGCGCGGCGCGGAAGGTGGTCGCTGTGGGAGGTACCGCGCCATGA
PROTEIN sequence
Length: 181
MTPASPAPVVPQLTAHRMRIIYDLHSAALLSTLLNWTYGDWQAAEDLMQETMVRAWQHLDTLDADPRTLRPWLFTVARRIAIDRFRARTARPPETEPEPLEETAAPGEPFERLLDRAAVVSALREVDELHRNALIHVYLMDRTVPEAAAVLGVPEGTVKSRIHHGLRAARKVVAVGGTAP*