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13_1_20cm_3_scaffold_938_23

Organism: 13_1_20CM_3_Actinobacteria_70_7

partial RP 34 / 55 MC: 5 BSCG 31 / 51 MC: 3 ASCG 8 / 38 MC: 1
Location: comp(16742..19765)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase su UNIPROT
DB: UniProtKB
  • Identity: 96.3
  • Coverage: 891.0
  • Bit_score: 1703
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta n=1 Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7Q2K7_CATAD similarity UNIREF
DB: UNIREF100
  • Identity: 96.4
  • Coverage: 891.0
  • Bit_score: 1704
  • Evalue 0.0
  • rbh
rpoB; DNA-directed RNA polymerase subunit beta similarity KEGG
DB: KEGG
  • Identity: 96.3
  • Coverage: 891.0
  • Bit_score: 1703
  • Evalue 0.0

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Taxonomy

Catenulispora acidiphila → Catenulispora → Catenulisporales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 3024
TTGGCCGCCTCGCGCACCGCCCAGAACATCACTAAGAACGCCGCCCGCCGCATCTCCTTCGCGAAGATCAAAGAGCCGCTCGAGGTTCCGAACCTGCTCGCGCTGCAGACGGAGTCCTTCGACTGGCTCGTCGGCAACGCGACCTGGAAGGCCCGTGTGGCCGCGCAGCAGGCCGCGGGCCTTGACGTGCCCACCGCCTCCGGTCTGGAGGAGATCTTCGAGGAGATCTCCCCGATCGAGGACTTCCAGGGCACCATGTCGCTGACGTTCCGCGACCACCGCTTCGAGCCCGCGAAGTACTCCATCGACGAGTGCAAGGACCGCGACTTCACCTACGCCGCGCCGCTGTTCGTGACCGCCGAGTTCACGAACAACGAGACCGGCGAGATCAAGAGCCAGACCGTGTTCATGGGCGACTTCCCGCTCATGACCAACAAGGGCACCTTCATCATCAACGGCACCGAGCGCGTCGTGGTGACCCAGCTGGTGCGCTCGCCGGGCCTGTACTTCTCCAAGGACATCGACAAGACCTCCGACAAGGACGTCTTCAACGCCAAGGTGATCCCCAGCCGCGGCGCGTGGCTGGAGTTCGAGATCGACAAGCGCGACATGGTCGGCGTCCGCGTCGACCGCAAGCGCAAGCAGCACGTCACCGTGCTCCTGAAGGCCCTGGGCTGGGACGACGCCCGGATCCTGGAGGAGTTCGGCGAGTACGAGTCCATGCGCCAGACCCTGGAGAAGGACCACACCGCCGGGCAGGACGAGGCGCTGCTGGACATCTACCGCAAGCTGCGCCCGGGCGAGCCGCCGACCCGCGAGGCCGCCCAGACCCTGCTGGACAACCTGTACTTCAACCCCAAGCGCTACGACCTGGCCAAGGTCGGGCGGTACAAGCTGGACAAGAAGCTGGGCCTGGCCAGCGGCATCGACAACACGGTGCTGACCGAGGACGACATCGTCGCCGCGATCAGGTTCCTGGTGAAGCTGCACGCCGGCGAGACCGAGATGGACCCGCAGGTCCCCGGCGCGCCGACGGTCGTGGTCGAGGAGGACGACATCGACCACTTCGGCAACCGCCGGCTGCGCAGCGTCGGCGAGCTGATCCAGAACCAGGTCCGCACCGGCCTGGCCCGGATGGAGCGCGTGGTCCGCGAGCGCATGACCACGCAGGACGTCGAGGCCATCACCCCGCAGACGCTGATCAACATCCGGCCGGTCGTCGCCTCCATCAAGGAGTTCTTCGGCACCAGCCAGCTGTCGCAGTTCATGGACCAGACCAACCCGCTGTCCGGCCTGACCCACAAGCGCCGGCTGAACGCGCTGGGCCCCGGCGGCCTGTCCCGCGAGCGGGCCGGCTTCGAGGTGCGCGACGTGCACCCCTCGCACTACGGCCGGATGTGCCCGATCGAGACCCCGGAAGGGCCGAACATCGGCCTGATCGGCTCGCTGGCCTCCTACGGCCGGATCAACGCCTTCGGGTTCATCGAGACCCCGTACCGCAAGGTGGTCGACGGCCGGGTCACCGACCACATCGACTACCTGACGGCCGACGAGGAGGACCGCTACGTCGTGGCCCAGGCCAACGCCCCGGTCACCGATGAGGGCTCCTACCTCGACGAGCGCGTGCTGTGCCGCCGCAAGGGCGGCGAGATCGAGATGATGACGCCGGGCGACATCGACTACATGGACGTCTCGCCGCGCCAGATGGTGTCGGTGGCCACGGCCATGATCCCGTTCCTGGAGCACGACGACGCCAACCGCGCGCTGATGGGCGCGAACATGATGCGCCAGGCCGTGCCGCTGCTGCAGTCGGACTCCCCGTACGTGGGCACCGGCATGGAGTACCGGGCCGCGGTCGACGCCGCCGACGTGGTGCTGGCCGAGAAGCCCGGCGTGGTGACCGAGGTCTCCGCGGACCTGGTGACCGTCGCCAACGACGACGCGACCACCAACGTCTACCGGATCGCCAAGTTCCGCCGTTCCAACCAGGGCACCTCCTTCAACCAGAAGGTGATCGTCTCCGAGGGCGACCGCGTCGAGGTGGGCACCGTGCTCGCCGACGGCCCGTGCACCCAGTACGGCGAGATGGCGCTGGGCAAGAACCTGCTCGTGGCGTTCATGCCGTGGGAGGGCCACAACTACGAGGACGCGATCATCCTGTCGCAGCGCCTCGTGCAGGACGACGTCCTGTCCTCGATCCACATCGAGGAGCACGAGGTCGACGCCCGGGACACCAAGCTGGGCCCGGAGGAGATCACCCGGGACATCCCGAACGTCTCCGAGGAGGTCCTGGCCGACCTCGACGAGCGCGGCATCATCCGGATCGGCGCGGACGTCGTCCCCGGCGACATCCTGGTCGGCAAGGTCACGCCCAAGGGCGAGACCGAGCTCACCCCCGAGGAGCGGCTGCTGCGCGCGATCTTCGGCGAGAAGGCGCGCGAGGTGCGCGACACCTCGCTGAAGGTGCCGCACGGCGAGCAGGGCAAGATCATCGGCGTCCGGATCTTCGACCGGGACAGCGGCGACGAGCTGCCGCCCGGCGTGAACCAGCTGGTCCGGGTGTACGTGGCGCAGAAGCGCAAGATCACCCACGGTGACAAGCTGGCCGGCCGGCACGGCAACAAGGGCGTCATCGCCAAGATCCTCCCGGTGGAGGACATGCCGGGCCAAGAACGGCTGGAAGCTCGACGTCGACGACACCGCGTGGAAGCAGTCGCTCGCGTCGATCGGAGCCGACTCGTCCGTACCGGACACGAACCTGGCGACGCCGGTGTTCGACGGTGCGCACGAGGAGGAGATCGCCGGGATGCTGGAGGCGTCGCTCCCGAACCGGGACGGCACCCAGCTGATCGGTTCCAGCGGCAAGGCGAAGCTGTTCGACGGTCGTTCCGGCGAGCCGTTCCCGTACCCGATCTCGGTCGGCTACATGTACATCCTGAAGCTGCACCACCTGGTGGACGACAAGCTGCACGCCCGCAGCACCGGCCCCTACTCGATGATCACGCAGCAGCCGCTGGGCGGTAA
PROTEIN sequence
Length: 1008
LAASRTAQNITKNAARRISFAKIKEPLEVPNLLALQTESFDWLVGNATWKARVAAQQAAGLDVPTASGLEEIFEEISPIEDFQGTMSLTFRDHRFEPAKYSIDECKDRDFTYAAPLFVTAEFTNNETGEIKSQTVFMGDFPLMTNKGTFIINGTERVVVTQLVRSPGLYFSKDIDKTSDKDVFNAKVIPSRGAWLEFEIDKRDMVGVRVDRKRKQHVTVLLKALGWDDARILEEFGEYESMRQTLEKDHTAGQDEALLDIYRKLRPGEPPTREAAQTLLDNLYFNPKRYDLAKVGRYKLDKKLGLASGIDNTVLTEDDIVAAIRFLVKLHAGETEMDPQVPGAPTVVVEEDDIDHFGNRRLRSVGELIQNQVRTGLARMERVVRERMTTQDVEAITPQTLINIRPVVASIKEFFGTSQLSQFMDQTNPLSGLTHKRRLNALGPGGLSRERAGFEVRDVHPSHYGRMCPIETPEGPNIGLIGSLASYGRINAFGFIETPYRKVVDGRVTDHIDYLTADEEDRYVVAQANAPVTDEGSYLDERVLCRRKGGEIEMMTPGDIDYMDVSPRQMVSVATAMIPFLEHDDANRALMGANMMRQAVPLLQSDSPYVGTGMEYRAAVDAADVVLAEKPGVVTEVSADLVTVANDDATTNVYRIAKFRRSNQGTSFNQKVIVSEGDRVEVGTVLADGPCTQYGEMALGKNLLVAFMPWEGHNYEDAIILSQRLVQDDVLSSIHIEEHEVDARDTKLGPEEITRDIPNVSEEVLADLDERGIIRIGADVVPGDILVGKVTPKGETELTPEERLLRAIFGEKAREVRDTSLKVPHGEQGKIIGVRIFDRDSGDELPPGVNQLVRVYVAQKRKITHGDKLAGRHGNKGVIAKILPVEDMPGQERLEARRRRHRVEAVARVDRSRLVRTGHEPGDAGVRRCARGGDRRDAGGVAPEPGRHPADRFQRQGEAVRRSFRRAVPVPDLGRLHVHPEAAPPGGRQAARPQHRPLLDDHAAAAGR*