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13_1_20cm_4_scaffold_16504_11

Organism: 13_1_20CM_4_Verrucomicrobia_54_11

near complete RP 42 / 55 MC: 3 BSCG 44 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: comp(7485..8381)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, LysR family n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XBV2_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 52.0
  • Coverage: 277.0
  • Bit_score: 297
  • Evalue 2.00e-77
Transcriptional regulator, LysR family {ECO:0000313|EMBL:EEF62420.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera. UNIPROT
DB: UniProtKB
  • Identity: 52.0
  • Coverage: 277.0
  • Bit_score: 297
  • Evalue 2.80e-77
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 45.6
  • Coverage: 272.0
  • Bit_score: 227
  • Evalue 4.10e-57

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 897
ATGAATATTCATCATCTCGAGCTCTTCTATTACGCCGCCCGTCATGGCGGAATCGTGCCCGCCGTTCGCAATATGCCATACGGGATCCAGCAACCGGCCGTCAGCGGCCAAATCGCGCGCCTGGAAGAATCTCTCGGTACCAAATTATTTAATCGTCGCCCGTTCGCCCTCTTGCCTCCGGGCGTGGAGCTATACGAATTCATTCGGCCCTTCTTCGACGAGATTGATCATGTTGGCGAGGCAATTCGCGGCGGCTCGGCTCAGCAACTGCGAGTGGCCGCGCCCGCCATTGTCCTGCACGATTATCTCCCGGAAATTTTGCGGCGTGTGCGGAAACGTTTTCCGGCCTTCCGGCTCACTCTCCATGAAGCGGCCCGCGCCGAAGCCGAACGACTGTTGCAGGCGGGCGAAATCGATCTGGCCGTTACCGTGATCGAACACAAGAAAAGAAGCGGAATTCGTTCACGCGCTTTGCTCGAATTGCCGCTGATCCTCCTAGTCAAGGCCACGCAGCGTCTCACTCGCGCCGACAAGTTGTGGGGTCGCGATAAAATTGAGGAAACGTTAATTACTTTTCGGCGCAGCGATCCTGTCTCTGTTCATTTTCAAGTTGGTCTCCAACAACTCGGCGTGGAATGGTTTCCCGGAATCGAGGTTAACTCTGCGCGCTTGATCGAATGTTATGTCGCGCATGGCTATGGAATTGGGTTAAGCGTGGCGACGCCGGGCTTCAAGACGCCGAAAGGAATTCGCGCACTCAAGTTACCGAATTTTCCCAAGGTCATGATCGGCGCCGCTTGGACGGGTACAGCGCCCGTAGCTCAACTGGATAGAGCATCTGACTACGGATCAGAAGGTTTGAGGTTCGAATCCCCACGGGCGCGCACTTACTGCTGA
PROTEIN sequence
Length: 299
MNIHHLELFYYAARHGGIVPAVRNMPYGIQQPAVSGQIARLEESLGTKLFNRRPFALLPPGVELYEFIRPFFDEIDHVGEAIRGGSAQQLRVAAPAIVLHDYLPEILRRVRKRFPAFRLTLHEAARAEAERLLQAGEIDLAVTVIEHKKRSGIRSRALLELPLILLVKATQRLTRADKLWGRDKIEETLITFRRSDPVSVHFQVGLQQLGVEWFPGIEVNSARLIECYVAHGYGIGLSVATPGFKTPKGIRALKLPNFPKVMIGAAWTGTAPVAQLDRASDYGSEGLRFESPRARTYC*