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13_1_20cm_4_scaffold_217_1

Organism: 13_1_20CM_4_Verrucomicrobia_54_11

near complete RP 42 / 55 MC: 3 BSCG 44 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: comp(101..4216)

Top 3 Functional Annotations

View all annotations
Value Algorithm Source
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase UNIPROT
DB: UniProtKB
  • Identity: 82.7
  • Coverage: 999.99
  • Bit_score: 2285
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta' n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D9K5_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 82.7
  • Coverage: 999.99
  • Bit_score: 2285
  • Evalue 0.0
  • rbh
rpoC; DNA-directed RNA polymerase subunit beta' similarity KEGG
DB: KEGG
  • Identity: 72.5
  • Coverage: 999.99
  • Bit_score: 2022
  • Evalue 0.0

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Taxonomy

Chthoniobacter flavus → Chthoniobacter → Spartobacteria → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 4116
ATGAACGAACATTCCTGGCGTGAGTTAGTGGGCGAAGAGCGGCCCGTGGGTTTTGATCAAGTCGCGATTGGCGTGGCGTCGAGTGACACGATGCGCTCGTGGAGCAAAGGCGAAGTCAAAAATCCTGAGACAATCAATTATCGGACTTTCAAACCGGAAAAGGGAGGCCTTTTCTGCGAACGCATTTTTGGTCCGACGCGCGACTGGGAATGCTCATGCGGAAAATACAAGCGTATCAAGCATAAGGGCGTCATCTGCGACCGGTGCGGCGTCGAAGTTACTTTGGCTCGGGTCCGCCGTGAACGGATGGGCCATATCGAATTGGCCGTACCCGTCTCGCACATCTGGTTTTACAAATGCATGCCCTCGCGAATCGGGCTCATGCTGGATATGAGCGCCCGGCAGCTCGAACGAATCATCTATTACGAGGATTACATCGTCATCGATCCGGGCAAGACGCCACTACAGAAAACACAACTGCTTAACGAAGTCGAATACCGCGAGGCGCAGGAGCAGTACGGCGAAGATTTCGTCGCGGGCATGGGTGCGGAAGCGATCAGAAAACTTCTGGCCGAGATCGATCTCAACAAGCTCAACAAAGAGCTTGAGAAGGCAATGGGCGCCACAAAGAGCAAACAGATTCGCAAGAAACTCGCGAAGCGCCTCAAGCTCATCCAGGGCTTCCAAAATTCGCATGCGCGTCCGGAATGGATGATTCTGGATGTATTGCCGGTTATTCCGCCGGATCTGCGCCCTTTGGTTCCCCTCGAGGGCGGACGGTTTGCCACCTCAGACCTGAACGATCTTTATCGCCGGGTTATTAATCGTAATAACCGGCTGAAAAACCTGCTCATGCTTAAGACGCCGGACGTCATCATTCGGAATGAAAAGCGGATGTTGCAGGAAGCGGTGGACGCTTTGTTCGACAATGGCAGACACGGTCGCGCTGTAACCGGCGCCGGGAATCGGCCTCTGAAGTCCCTGAGCGACATGCTCAAGGGCAAGGGTGGGCGTTTCCGTCAAAATTTGCTTGGCAAACGCGTCGATTACTCAGGCCGGTCCGTAATTGTGATCGGCCCAGAGCTAAAGCTGCATCAGTGCGGATTGCCGAAGAAGATGGCGCTGGTGCTTTTCGAGCCGTTTATTATCCGGCGGCTGAAAGATTTGGGCTACGTGCACACGGTGCGCAGCGCGAAAAAGATGATCGAGCGTCAGACGCCCGAGGTATGGGACATTCTCGATGAAGTGACCAAAGGTCATCCGGTGCTGCTCAATCGCGCGCCCACTCTACATCGATTGTCCATTCAGGCTTTTGAACCGCAATTGATCGAAGGCGAAGCCATTCGCATTCACCCCTTGGTTTGCACAGCTTACAATGCGGACTTCGACGGGGACCAGATGGCAGTGCATGTACCGCTCTCGGTGGAGGCCCAGATGGAAGCACGCATGCTAATGCTCGCGCCGAATAACATTTTTTCCCCATCCAGTGGCAAACCCATTACGACGCCTTCCCAGGATATCACCCTCGGTTGTTACTACCTCACCCAGAACCCTCGCGGCGCTAAAGATGGCCAGCGGCTCCCGCTCTTCGGCGATGCGGCCGAGGTAGAATTCGCAATGGCAGAAGGAAGCATTCGCGCACATGACCGTATCCGGATTAAGAACCCGGATTTCGGTAAGCAAACGATCTATGGAAATGCTGAAGCCAAAACGATCGAAACCACCTCGGGTCGCGTCGTTTTTAATGAGATTTGGCCCAAGCAGCTTGGATTTTTCAACAGACCCGCCGGCAAGAAGCAACTTAGCGACATCATCTGGCGCTGTTATCAAATTGCAGGACCAGCCGAAACTGTCGCGACGCTGGACAAATTAAAAGAGCTCGGCTTTGCCGAGGCCACCAAAGCTGGCATCTCCATTGGGATTTCGGACATGATCATTCCGAAAGAAAAAGAGACCGAGCTGGAAAACGCCTATAAGCAGATTCGACAGGTTGATCAGCAATATCGCAAAGGCATCATCACCGATGGCGAGCGCTACAATAAGATTATCGATATCTGGACGCACGCCGGTGACGAAATTTCCAGTGCTATGTTCCGCACTCTGGAACACAATGACGGCCGCAAGGAGTTGAATCCTGTTTTCTTGATGGTCGATTCCGGTTCACGTGGCAACCGCCAGCAGGTCCGTCAGCTCGCAGGTATGCGCGGTTTGATGGCCAAACCTTCAGGTGAAATCATTGAGCGACCGATCACATCGAACTTCCGCGAAGGGCTGAGCGTGCTCGAGTATTTCATTTCTACACACGGTGCTCGCAAGGGTCTTGCTGACACCGCGCTAAAGACGGCTGACTCCGGCTATCTAACGCGCAAACTGGTCGACGCTGCACAGGACGTCATTATCAATGAACAGGACTGCGGCACTGTAAACGGCATCGTAGTGCGCTCAATTTACGAGGGCGACGAAGAAGTAGTCGATCTTGGTCAGCGCATTATCGGACGCGTAAGCTGCGAAACGATCGCTGATCCGGTGGACAAAAAGAAGAAGATCGTCAAAGCGAATCAGTTGATCGATGAAAAGATCGCTGCGGATCTTCAGCGAGTGGGCGTCGAGAGCTTGAAGATTCGTTCGGTTCTTACCTGTGAGTGTGGCCGGGGCGTCTGCGCAATGTGCTATGGGCGCAATCTGGCTACGGGCCAATTCGTTAAGCTTGGCGAAGCGGTAGGGATTATCGCAGCCCAATCGATTGGCGAGCCGGGAACACAATTAACGATGCGCACGTTCCACATCGGCGGCACCGCCAGCCAGACCTTCAAGCAACCAATCATCAAGGCCAAAAACGACGGCACCGTCCGCTTCAACGACTTGCGGACAGTGCAGGCGCTCGACGGCAGTTGGATCGCTTTGAACAAGAACGGTTCGATCAGTGTGCACAACGAAGAAGGCCGCGAACTCGAGCGTTACAACGTGGTGATCGGATCAATGATCTCCAAAGGTGACGGAGGCTCGGTTAAGAAGGGCGAAACCTTCGTTCAATGGGATCCATACAATGTGCCTATTCTCACCGACAAAGGTGGCAAGATCGAATTCCGCGATATGATCGCCGGTGTCACGATCAAACGCGACGTCGATGAGGCGACCGGCCTGATGGGCACCGTTATTATTGAGCACAAAGAGGATTTGCATCCACAAATCGTTATCGTGGATGACAAGAAGGAGGTACTCGCGAGTTATTCCATCCCGGCTGGCGCCCACGTGATCGTGGAAGAAGGCCAAAAGGTGCGTGGTGGCGCGCTACTGGCCAAGACGCCCCGGAAGGTAGCAAAGACCAAAGATATTACTGGAGGTCTGCCGCGTGTGGCGGAATTATTCGAAGCGCGTCGGCCAAAAGATGCGGCGGAGATTGCAAAAATCGACGGAGTTGTTGAGATGGGCGGCACCGTCCGCGGAAAGCGACGCTTGATTTTGAAGGATCCCGACACCGGAGCGGAGGAAGAACACCTAATCCCGCTTAACAAACACATTATCGTGTTTAAGGGCGATTTCGTAAAGAAGGGTCAGCAACTTACCGAGGGACCCGTCGTTCCCCATGAAATCCTCGAGGTCTGCGGACCGCAGGATTTGCAAGAGCACCTCGTCAATGAAGTGCAAGAGGTATATCGGTTGCAGGGTGTGGAGATTAACGACAAGCACATCGAAATCATCGTGCGTCAAATGTTGCGAAAAGTGAAGATTACCGATCCTGGCGATACATCGTTGCTCTGGGGCGATCAGGTCGACAAGCTCGATTTCGAGGAGGAAAACAAGAAGGTCGTCGAGAAGGGTGGTAAGCCGGCAGAAGCCGTTCCCGTCTTACTCGGCATCACGAAGGCTTCACTCGAGACGGACAGCTTTATCTCTGCTGCTTCATTCCAGGATACGACTCGTGTTCTTACAGAAGCGGCTACACTGGGTAAGGTGGATAGGCTGCGCGGTTTCAAGGAAAATGTGATCATGGGTCACTTGATCCCCGCCGGTACCGGTTTCCCCGAGCACCGCGAGATCAAGTTGGTCGAAAAGGGTGAGCCAATTGGCGCACCGGTAATGGAAGAAGCCGAGCCGCAGCCGGCCATCGGGTAA
PROTEIN sequence
Length: 1372
MNEHSWRELVGEERPVGFDQVAIGVASSDTMRSWSKGEVKNPETINYRTFKPEKGGLFCERIFGPTRDWECSCGKYKRIKHKGVICDRCGVEVTLARVRRERMGHIELAVPVSHIWFYKCMPSRIGLMLDMSARQLERIIYYEDYIVIDPGKTPLQKTQLLNEVEYREAQEQYGEDFVAGMGAEAIRKLLAEIDLNKLNKELEKAMGATKSKQIRKKLAKRLKLIQGFQNSHARPEWMILDVLPVIPPDLRPLVPLEGGRFATSDLNDLYRRVINRNNRLKNLLMLKTPDVIIRNEKRMLQEAVDALFDNGRHGRAVTGAGNRPLKSLSDMLKGKGGRFRQNLLGKRVDYSGRSVIVIGPELKLHQCGLPKKMALVLFEPFIIRRLKDLGYVHTVRSAKKMIERQTPEVWDILDEVTKGHPVLLNRAPTLHRLSIQAFEPQLIEGEAIRIHPLVCTAYNADFDGDQMAVHVPLSVEAQMEARMLMLAPNNIFSPSSGKPITTPSQDITLGCYYLTQNPRGAKDGQRLPLFGDAAEVEFAMAEGSIRAHDRIRIKNPDFGKQTIYGNAEAKTIETTSGRVVFNEIWPKQLGFFNRPAGKKQLSDIIWRCYQIAGPAETVATLDKLKELGFAEATKAGISIGISDMIIPKEKETELENAYKQIRQVDQQYRKGIITDGERYNKIIDIWTHAGDEISSAMFRTLEHNDGRKELNPVFLMVDSGSRGNRQQVRQLAGMRGLMAKPSGEIIERPITSNFREGLSVLEYFISTHGARKGLADTALKTADSGYLTRKLVDAAQDVIINEQDCGTVNGIVVRSIYEGDEEVVDLGQRIIGRVSCETIADPVDKKKKIVKANQLIDEKIAADLQRVGVESLKIRSVLTCECGRGVCAMCYGRNLATGQFVKLGEAVGIIAAQSIGEPGTQLTMRTFHIGGTASQTFKQPIIKAKNDGTVRFNDLRTVQALDGSWIALNKNGSISVHNEEGRELERYNVVIGSMISKGDGGSVKKGETFVQWDPYNVPILTDKGGKIEFRDMIAGVTIKRDVDEATGLMGTVIIEHKEDLHPQIVIVDDKKEVLASYSIPAGAHVIVEEGQKVRGGALLAKTPRKVAKTKDITGGLPRVAELFEARRPKDAAEIAKIDGVVEMGGTVRGKRRLILKDPDTGAEEEHLIPLNKHIIVFKGDFVKKGQQLTEGPVVPHEILEVCGPQDLQEHLVNEVQEVYRLQGVEINDKHIEIIVRQMLRKVKITDPGDTSLLWGDQVDKLDFEEENKKVVEKGGKPAEAVPVLLGITKASLETDSFISAASFQDTTRVLTEAATLGKVDRLRGFKENVIMGHLIPAGTGFPEHREIKLVEKGEPIGAPVMEEAEPQPAIG*