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13_1_20cm_4_scaffold_2172_11

Organism: 13_1_20CM_4_Verrucomicrobia_54_11

near complete RP 42 / 55 MC: 3 BSCG 44 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: 11759..13627

Top 3 Functional Annotations

Value Algorithm Source
Cobalamin uptake ligand-gated TonB-dependent outer membrane channel n=1 Tax=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) RepID=Q3A7D0_PELCD similarity UNIREF
DB: UNIREF100
  • Identity: 34.0
  • Coverage: 630.0
  • Bit_score: 339
  • Evalue 7.20e-90
Cobalamin uptake ligand-gated TonB-dependent outer membrane channel {ECO:0000313|EMBL:ABA87714.1}; TaxID=338963 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Pelobacterac UNIPROT
DB: UniProtKB
  • Identity: 34.0
  • Coverage: 630.0
  • Bit_score: 339
  • Evalue 1.00e-89
btuB; cobalamin uptake ligand-gated TonB-dependent outer membrane channel similarity KEGG
DB: KEGG
  • Identity: 34.0
  • Coverage: 630.0
  • Bit_score: 339
  • Evalue 2.00e-90

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Taxonomy

Pelobacter carbinolicus → Pelobacter → Desulfuromonadales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1869
ATGCGGCTCGCCGCGCTTCTAATCTTCGCGCCAGTTGTTTGCTTCAGTCAGCAACCGACGCCTACTCCTTCGCCAGTTGAAGCGGAGGCCGAGCAAGTTGTTGTTACTGCAACGCGTTTCGATATTCCGCTCGATCTATCGCCAGCCAGCGTGAGCGTGATTAACTCAGAAGATTTCGAGCAAAAACAAATCGAACGCGTCAGTGATGCACTTCGTGAAGTGCCTGGTCTGTCCGTTGTTCAAACCGGAACAGCCGGCCAGTTGACCTCGGTGTTTACTCGCGGATTGCGCAGCGAACACACGCAGGTTTTGCTCGATGGCATCCCGATCAATCAGGGTTTGCAAGGTGCCTTTAATTTCGCCGATCTGACCATCGACGATATAGACAGGATCGAAGTTGTGCGCGGGCCGCAGAGTACCTTGTACGGACCGCGCGCCCTCGCAGGCGTTATCCAGATTTTTACCAAACAAGGCACAGGGGCGCCAGGAGCGATGGTCGCCGCCGAAGGCGGATCATATGACACCTTCCGCGAATGGGGCGAGAGCGACGGCAAGATCGGCAACTTCGATTATTCAGTCGGCGCAAGCCGCCTCGACACAGACAACGCCCGCCCAAACAATAATTACCGCAACACTGCTGCGATTACCGACGTTGGCTGGTCGCCGGACCAACAATTGCGGATCGGCAGCTTGTTCACTTACTCGGTTAGCGACACTGGAAATCCAAACACGATCTTCGATCCACGTCCCATTGATCACTTTCTTACAGAGCGTTGGTTAATTGGCCCTCATATCGATTGGAAAGCGACTGACTGGTGGGACCACAAATTTATTTTCAGCTACGATCATGAGCGACAATTGAACAATCCGAACCAGGATGGCTTTGTCGGCCCGACTCGGGCCCTCTTTGAACGTACGCAAATTGATTATCAAAATGATTTGCGTCCAACCTCGTGGCTCACGCTCACCTCCGGCTTTTTCTACAGCCGAGTCAACGCCGGACAGGAGCGCCCATTTGTTCTGCAGATTTTTGGACCGCAACCAACATTTGTAAGCGATCACACGGAAGAAATCGCCGGATTCTTGCAGGCGACGCTGACGCCGATTGAGAATTTGATCTTTGTCGCCGGCGGCCGCTTCGATCACTTCAATCAGTTCGGCGGCGTCTGGACTTATCGCGTCGCCGGCACTTACAAGATTGACAGGACAAACACAATTTTGCACTCCAGTGTGGCGACCGGATTCAGTCCGCCAAGCAGTCAGGACAAAATTTTCGGAAATAACTTCGGACTCAAACCCGAACGAGACCTGGGCTGGGACATCGGGGTCAGACAGGAGCTCTGGCAAAACCGCGTTGGCGTCGGCCTGACTTATTTTCACAACGATCTGTCGAACGCGATTGGGTCCAACGGTCTTTTTCAAACATTGAACCTCGGAGCCGCAGAGACGCAAGGGCTCGAAGCGGAGCTGCGCGCGCAACCGATTGCCAATCTCGTGCTCACGGCCAGCTACACATATCTGGAAGCAGAAAACACTTCCTCGAAAGATATTACGCAATTGCAAGGCGCGCGTCTGCCACGGCGGCCGCGCAACGAACTTTACGCTTCAGTTTCGTATCTTTGGTGGAAAAAACTGCGCACAGTGGTCGAAGCAAAGTTCGTAAACGCGCGAGAAGAACTAAACTTTGGCGGACCAAATTTCGACATCGAAGATTACAGTTTTGTGAACGTCGCGGCCGAATACGAAGTCAATCCGCACCTTTCGATCTTCGGTCGGATTGATAATCTGGTGAACGAACATTATTCGGAAGTATTCGGTTTCCCCGCAATCGGCCGCGCCGCATACGGAGGAGTGAAACTCCGCTTCTAG
PROTEIN sequence
Length: 623
MRLAALLIFAPVVCFSQQPTPTPSPVEAEAEQVVVTATRFDIPLDLSPASVSVINSEDFEQKQIERVSDALREVPGLSVVQTGTAGQLTSVFTRGLRSEHTQVLLDGIPINQGLQGAFNFADLTIDDIDRIEVVRGPQSTLYGPRALAGVIQIFTKQGTGAPGAMVAAEGGSYDTFREWGESDGKIGNFDYSVGASRLDTDNARPNNNYRNTAAITDVGWSPDQQLRIGSLFTYSVSDTGNPNTIFDPRPIDHFLTERWLIGPHIDWKATDWWDHKFIFSYDHERQLNNPNQDGFVGPTRALFERTQIDYQNDLRPTSWLTLTSGFFYSRVNAGQERPFVLQIFGPQPTFVSDHTEEIAGFLQATLTPIENLIFVAGGRFDHFNQFGGVWTYRVAGTYKIDRTNTILHSSVATGFSPPSSQDKIFGNNFGLKPERDLGWDIGVRQELWQNRVGVGLTYFHNDLSNAIGSNGLFQTLNLGAAETQGLEAELRAQPIANLVLTASYTYLEAENTSSKDITQLQGARLPRRPRNELYASVSYLWWKKLRTVVEAKFVNAREELNFGGPNFDIEDYSFVNVAAEYEVNPHLSIFGRIDNLVNEHYSEVFGFPAIGRAAYGGVKLRF*