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13_1_20cm_4_scaffold_2703_3

Organism: 13_1_20CM_4_Verrucomicrobia_54_11

near complete RP 42 / 55 MC: 3 BSCG 44 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: comp(3256..4008)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XQ22_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 46.5
  • Coverage: 245.0
  • Bit_score: 203
  • Evalue 3.20e-49
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF49139.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;" UNIPROT
DB: UniProtKB
  • Identity: 68.6
  • Coverage: 245.0
  • Bit_score: 336
  • Evalue 4.50e-89
RNA polymerase sigma-70 factor similarity KEGG
DB: KEGG
  • Identity: 42.0
  • Coverage: 250.0
  • Bit_score: 180
  • Evalue 4.80e-43

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Taxonomy

uncultured bacterium → Bacteria

Sequences

DNA sequence
Length: 753
TTGAATGCGGAAGCCGAACCGCGCTTGTTTGCCACCACGCGCTGGAGTCTCGTCCTTGCTGGGGCGAACTCCGATGGCGACGAGCAGAAGGCAGCTGAAGCGCTGGCAGAGCTTTGCCGCACTTACTGGCGACCCATTTTTTCCTACGTCTGTCGCCGCGGTTACTCGAGTGAGGACGCGCAGGACCTTACGCAAGATTTCTTCCTGATGATTCTGGAAACGAACTGGCTACAGCAGGCCGACAAAGGCCGCGGCCGTTTCCGGTCGCTCTTGCTCAAGTCGCTCCAGAATTTCCTTCACAACGTAGCCGATAAGAAACAAACCCTGAAGCGAGGCGGCAGCGTTCAATTCGTTTCCTGGGATGCCTGGATGGCAGAAGCGCCCTCGCAATTATCGATCTCGGATCGCGCGCTCGACGCGCTTGCACCCGAGCGGCTGTTCGATCTTCGCTGGGCCGTGACAGTCGTGGAGCAGGCGCTCCGACGTTTACGGGAGGAGTGCGAAGGTAAAGGACGTCTTCGCCTTTTTGAGGGATTGCGCGATCACCTTGCGGCAGAACACGCCGACATCTCATATGCCGATCTCGGTATCGCGTTAGGCGTTGCAGAGGCGGTCGTGAAAAAACAACTACACAACTTGCGCCAGCGTTATCGGTGGCTCCTGCGCGAGGAGGTCGCTCACACGGTTGAGAACCCGGCCGACGTAGACGACGAGATCCGACACTTGTGCGCGGCACTAGCCGCCGCTGCGTGA
PROTEIN sequence
Length: 251
LNAEAEPRLFATTRWSLVLAGANSDGDEQKAAEALAELCRTYWRPIFSYVCRRGYSSEDAQDLTQDFFLMILETNWLQQADKGRGRFRSLLLKSLQNFLHNVADKKQTLKRGGSVQFVSWDAWMAEAPSQLSISDRALDALAPERLFDLRWAVTVVEQALRRLREECEGKGRLRLFEGLRDHLAAEHADISYADLGIALGVAEAVVKKQLHNLRQRYRWLLREEVAHTVENPADVDDEIRHLCAALAAAA*