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13_1_20cm_4_scaffold_464_15

Organism: 13_1_20CM_4_Verrucomicrobia_54_11

near complete RP 42 / 55 MC: 3 BSCG 44 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: comp(11567..12610)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit alpha; K03040 DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated UNIPROT
DB: UniProtKB
  • Identity: 77.1
  • Coverage: 332.0
  • Bit_score: 507
  • Evalue 1.60e-140
DNA-directed RNA polymerase subunit alpha n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4DBM6_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 74.1
  • Coverage: 332.0
  • Bit_score: 481
  • Evalue 8.50e-133
DNA-directed RNA polymerase subunit alpha similarity KEGG
DB: KEGG
  • Identity: 69.3
  • Coverage: 329.0
  • Bit_score: 448
  • Evalue 1.70e-123

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Taxonomy

RHI_Verrucumicrobia_41_10 → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 1044
ATGCCAATCCGTTACGGTCGTTTTGAGATGCCGAAAGCTCTCGCCAAAGACGAGAGCACAGCCACAGATACTTACGCCAAATTCACCGCCGAGCCGTTTGAGGCCGGTTATGGGCACACCGTAGGGAATTCGCTCCGGCGCGTCCTGCTTTCCTCTTTGGAAGGCGCTGCCATCACTGCAGCAAAAATCACGGGCGCCCAACATGAATTCGCCACTCTTCCGGGCGTAGTGGAGGACGTGACCGACATCGTCCTCAACCTCAAAAAGGTAAAATTCAAGCTCGATGGCCAGGATCACGAGCCGAAAAAACTCTCCCTTGTTGTAAACAAAGAAGGCCAAGTCACTGCCGGCGACATCCAAACCATTCAGGGTTTTGAAGTGCTCAACCCTAAGCAGCTCATTTGCACTCTGGACAAGAAGCACAAGTTCGACGCCGAGCTTGATGTACGCGTCGGTCGCGGTTTTGCCACTGGCGAGGAAAATAAGCGCCCAGACCAGCCGATCGGCCTGATTCCAATCGATTCCATCTTTTCTCCGGTCACGCGCGTCAAGTACGCTGTGGAAAACACTCGTGTCGGTCAGCGAACCGATTACGACAAGCTCATCCTTGAAATCTGGACCGACGGACGCTTGTCGCCGGACGAGGCGTTGCTCCAGGCCTCAGCCATTTTGCGGCACCACCTCGATGTGTTCGTGAACTTTAACGAAGAAGTGATCGAGTTCGACCAGACTCCGGCCGGCGTGAGTGAAGAAAACCTGAAGCTCAAGAAGCTGCTCAACATGAGTGTCAACGAAATCGAGCTCAGCGTGCGCGCAGCCAATTGCTTGAATAATGCGAACATCACTTCAGTAGGCCAGCTTGCCCAAAAGACCGAAGCCGAAATGCTGAAGTATCGTAATTTCGGCAAGAAATCGTTGAACGAAATTAAGGACAAACTGCAACAGCTGGGTTTGGGCCTGGGCATGAAATTTGAGCCCGGCCTTCTGGACGCTCCGGTGAGCAGCGATGGCGCCGTCGCGAGCGGAGCAGCTGGCGAAGAGTAA
PROTEIN sequence
Length: 348
MPIRYGRFEMPKALAKDESTATDTYAKFTAEPFEAGYGHTVGNSLRRVLLSSLEGAAITAAKITGAQHEFATLPGVVEDVTDIVLNLKKVKFKLDGQDHEPKKLSLVVNKEGQVTAGDIQTIQGFEVLNPKQLICTLDKKHKFDAELDVRVGRGFATGEENKRPDQPIGLIPIDSIFSPVTRVKYAVENTRVGQRTDYDKLILEIWTDGRLSPDEALLQASAILRHHLDVFVNFNEEVIEFDQTPAGVSEENLKLKKLLNMSVNEIELSVRAANCLNNANITSVGQLAQKTEAEMLKYRNFGKKSLNEIKDKLQQLGLGLGMKFEPGLLDAPVSSDGAVASGAAGEE*