ggKbase home page

13_1_20cm_4_scaffold_478_8

Organism: 13_1_20CM_4_Verrucomicrobia_54_11

near complete RP 42 / 55 MC: 3 BSCG 44 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: comp(6003..6701)

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease HII {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SAAS00016879}; Short=RNase HII {ECO:0000256|HAMAP-Rule:MF_00052};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SA UNIPROT
DB: UniProtKB
  • Identity: 65.3
  • Coverage: 199.0
  • Bit_score: 262
  • Evalue 5.80e-67
ribonuclease H (EC:3.1.26.4) similarity KEGG
DB: KEGG
  • Identity: 55.6
  • Coverage: 196.0
  • Bit_score: 204
  • Evalue 2.90e-50
Ribonuclease HII n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CV55_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 65.3
  • Coverage: 199.0
  • Bit_score: 262
  • Evalue 4.20e-67

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Chthoniobacter flavus → Chthoniobacter → Spartobacteria → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 699
ATGTATCGGCGATGCGGATTTCGTTACGAGAAAAAACTGCGCGGCACCGGTGTCGCGCGTATTGCCGGGATTGATGAAGCTGGCCGGGGGGCGTTGGCTGGCCCGGTTGTGGCTGCGGCGGTAGTTCTCCCTGAAAAATTTCGTCACCGTCGTCTAAATGATTCCAAGCAGCTTGCACCGGAATTGCGCGAGGAGATCCATTCGGATCTGGTGTCTAATCCCGAAGTCAGATGGACGGTTGGCGCTGTCGATTCCGTTGAGATTGATCGCATCAACATTCTGCGCGCGAGCCATCGAGCGATGCGCCTGGCAATCACAGCACTGATCGACCCGCCCGATCATGTTTTGATCGATGGACTGCCAGTCATTCCTTTTCCGCTTCCGCAGACTGCGATTATTGACGGCGACTGCATCAGTCTGAGCATCGCTGCAGCGAGCGTGATCGCCAAGGTAACGCGGGACCGAATGATGCGTGACTTTTGCGCCCAGTTCCCGCAGTATTGCTTCCACCAACACAAAGGTTACGGAACCGAACTGCATCTGCTGAAACTCCATGAATTCGGCCCTTGCCCAATCCATCGCCGATCTTTCGAACCGGTGGCACAACCGCTTCTCGCATTGGAGGAAGTCGTCCAAGTCCGGTCATCTTCGGCGAGGCGTTCTCGGCGAGAAGTTGGCGTGTCGCTATCTCAAGCGTAA
PROTEIN sequence
Length: 233
MYRRCGFRYEKKLRGTGVARIAGIDEAGRGALAGPVVAAAVVLPEKFRHRRLNDSKQLAPELREEIHSDLVSNPEVRWTVGAVDSVEIDRINILRASHRAMRLAITALIDPPDHVLIDGLPVIPFPLPQTAIIDGDCISLSIAAASVIAKVTRDRMMRDFCAQFPQYCFHQHKGYGTELHLLKLHEFGPCPIHRRSFEPVAQPLLALEEVVQVRSSSARRSRREVGVSLSQA*