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13_1_20cm_4_scaffold_5425_4

Organism: 13_1_20CM_4_Verrucomicrobia_54_11

near complete RP 42 / 55 MC: 3 BSCG 44 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: comp(5593..6261)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CTP3_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 61.1
  • Coverage: 203.0
  • Bit_score: 248
  • Evalue 6.00e-63
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:EDY21939.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428 UNIPROT
DB: UniProtKB
  • Identity: 61.1
  • Coverage: 203.0
  • Bit_score: 248
  • Evalue 8.40e-63
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 53.8
  • Coverage: 195.0
  • Bit_score: 216
  • Evalue 9.20e-54

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Taxonomy

Chthoniobacter flavus → Chthoniobacter → Spartobacteria → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 669
GTGGCTACGGACTTGGCCGGGGTCAACGCCCTCAGCTACAATACAATCCACATGAAGACTGCCGGATTACTAGCCACTCGTCGCAGCCTGGTGGATCGACTTGCGAACTGGGACGATCAACGGCGCTGGCAGGACTTTTTCGATACCTATTGGAAACTGATTTACTCGGCGGCACGAAAATCCGGTCTGACCGATTCCGAGGCGCAGGAAGTCGTGCAGGAAACCGTCATTACCGTGGCAAAGAAGATCGACAAATTGCATTATGATCCCGCGCTCGGCTCCTTCAAAGGCTGGCTGTTGCAAATCACGCGCTGGCGTATCGCGGATCAATTTCGAAAGCGCGACAGTATGCAAACTCAGCGCGAACATCCAGAGGAGGATCGCAAGACGGCCACCATTGAACGCCTGCCCGACTTAAACGTTGTCGATCTTGACGTGCTCTGGGAACGGGAATGGCAGGAAAACTTGTTCGACGCTGCGATCGCCCGAGTGAAGAAGAAGGTCGATCCGAAACAGTTTCAGATATTCGATTGCTACGTGCGCAAAGAATGGCCAGCGCAAAAAGTGGCTGCACAATTGCGAGTGAGCGTGGGTCAGGTTTATCTCGCCAGGCATCGTGTTGCTGCCCTCTTGAAAAAGGAGATCAAGGCGCTGGAGTGCTCTAGGTAG
PROTEIN sequence
Length: 223
VATDLAGVNALSYNTIHMKTAGLLATRRSLVDRLANWDDQRRWQDFFDTYWKLIYSAARKSGLTDSEAQEVVQETVITVAKKIDKLHYDPALGSFKGWLLQITRWRIADQFRKRDSMQTQREHPEEDRKTATIERLPDLNVVDLDVLWEREWQENLFDAAIARVKKKVDPKQFQIFDCYVRKEWPAQKVAAQLRVSVGQVYLARHRVAALLKKEIKALECSR*