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13_1_20cm_4_scaffold_5186_3

Organism: 13_1_20CM_4_Verrucomicrobia_54_11

near complete RP 42 / 55 MC: 3 BSCG 44 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: comp(1462..1989)

Top 3 Functional Annotations

Value Algorithm Source
Tetracycline efflux transporter n=1 Tax=Candidatus Nitrospira defluvii RepID=D8P7J5_9BACT id=5223809 bin=16ft_combo_ws3_JS1 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade similarity UNIREF
DB: UNIREF100
  • Identity: 45.9
  • Coverage: 135.0
  • Bit_score: 119
  • Evalue 3.30e-24
major facilitator transporter similarity KEGG
DB: KEGG
  • Identity: 46.8
  • Coverage: 141.0
  • Bit_score: 119
  • Evalue 7.10e-25
Tax=BJP_IG2103_SUB10_Xanthomonadales_61_45 UNIPROT
DB: UniProtKB
  • Identity: 44.5
  • Coverage: 137.0
  • Bit_score: 129
  • Evalue 5.80e-27

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Taxonomy

BJP_IG2103_SUB10_Xanthomonadales_61_45 → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 528
GTGATTTCTGCTGGTCTGACCGGACGAATCGTCACCTGGCTCGGCGAGCGTCGAACCCTTTACATCGGCCAGTTTTTCGGTGCGGTTGGAATGTTGATCGCGGGACTCGCGCGCAATGGCGCGATGTACATGGCGTCAATTCCCGTGATTTCGATGTGGAATATTTCCTTTCCAGCCGCGCAAGGAATCATGACGCACCATGTGAGCGAACAAGAACAAGGCGAATTGCAGGGCGCGATCAGCAGCTTGCGGTCCATCGCTTTCGTCATCGGCCCATTTTTGTTTTCGTGGACCTTCGCCTGGTTTATCGACCCGAGACATTCCTTCCACGTCCCCGCCGCGGGATATTATTTGGCAGCCGCACTTCTCTTCACCGCAATGCTAATGGCAACGGGGATCAGACAACCGGACTTTTCTGCCGCAAAATCTCCGCCTCCAGATCGCATTCCTGATGTCGTGCCGCCCGAAGGTGTCACTTCCGGAAATGTCGCGCCGCTCCCCGATGCTTTGAGGCGGGATGACGTCTAA
PROTEIN sequence
Length: 176
VISAGLTGRIVTWLGERRTLYIGQFFGAVGMLIAGLARNGAMYMASIPVISMWNISFPAAQGIMTHHVSEQEQGELQGAISSLRSIAFVIGPFLFSWTFAWFIDPRHSFHVPAAGYYLAAALLFTAMLMATGIRQPDFSAAKSPPPDRIPDVVPPEGVTSGNVAPLPDALRRDDV*