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13_1_20cm_4_scaffold_5719_15

Organism: 13_1_20CM_4_Verrucomicrobia_54_11

near complete RP 42 / 55 MC: 3 BSCG 44 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: 14578..15411

Top 3 Functional Annotations

Value Algorithm Source
DNA repair protein n=1 Tax=Verrucomicrobium spinosum RepID=UPI0001744E06 similarity UNIREF
DB: UNIREF100
  • Identity: 63.5
  • Coverage: 277.0
  • Bit_score: 363
  • Evalue 2.70e-97
Non-homologous end joining protein Ku {ECO:0000256|HAMAP-Rule:MF_01875}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphae UNIPROT
DB: UniProtKB
  • Identity: 64.8
  • Coverage: 281.0
  • Bit_score: 358
  • Evalue 1.20e-95
Ku domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 64.5
  • Coverage: 282.0
  • Bit_score: 350
  • Evalue 3.90e-94

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 834
ATGCGAGCGATCTGGAAAGGCAGCATCAGCTTCGGGTTAGTAAACATTCCCATTGCCCTCTACCCCGCCACCCGCAAAGAAGAACTGAAATTCCGGCTCTTGCGCGCGAAGGATTTGAGCCCGGTTAATTACAAGCGCGTGGCAGAGAAGGACGGCAAGGAAGTACCGTGGGATGACATCGTCAAAGGCTACGAATACGAAAAGGGGAAATACGTTGTTCTGAAGGATGAAGACTTTCAACGGGTCGATCTTGAGGCAACTCAAACCGTAGACATCCAGGATTTCGTCGATCAGCAAGAAATCGATCCGATATTCTTCTATAAACCCTACTACCTAGAGCCACAAAAAGGGGGCGACAAAGCTTATGTCTTGCTGCACGAGACGCTGGCGAAGACCGGCAAGGTCGGGATCGCCAAAGTTGTAATCAAAACGCGCCAATATCTCGCTGGAGTGAAAGCGAAGGATAGTGTCCTCGTGCTGGAACTGATGCACTTCGCTGAGGAACTGGCGGACGCAGACAAGCTCCATATCCCAAAGAAGCTCGAACCCGGAAAGCGGGAACTCGATATGGCAAAAGCGCTCGTCGAGAGCATGTCGTCGAAATGGGATCCGAAAAAATATCGCGATGATTACCGCGAAGCCTTGATGGAGGTGATCGAGGAGAAAGTTGAAGCAGGTGGGAAAGAAATCGAAGAAAAACCGAAACCGAAGCCACGACCATCTACGAAAGTGATCGATCTCGTGTCGGTCCTGCAGGAGAGCCTGAACAAGACAAAAAAATCGCATCACGCGCGCAAGAGTTCAGCCGCAACGCGTCACAGAAAGGCCGCGTGA
PROTEIN sequence
Length: 278
MRAIWKGSISFGLVNIPIALYPATRKEELKFRLLRAKDLSPVNYKRVAEKDGKEVPWDDIVKGYEYEKGKYVVLKDEDFQRVDLEATQTVDIQDFVDQQEIDPIFFYKPYYLEPQKGGDKAYVLLHETLAKTGKVGIAKVVIKTRQYLAGVKAKDSVLVLELMHFAEELADADKLHIPKKLEPGKRELDMAKALVESMSSKWDPKKYRDDYREALMEVIEEKVEAGGKEIEEKPKPKPRPSTKVIDLVSVLQESLNKTKKSHHARKSSAATRHRKAA*