ggKbase home page

13_1_20cm_4_scaffold_61_6

Organism: 13_1_20CM_4_Verrucomicrobia_54_11

near complete RP 42 / 55 MC: 3 BSCG 44 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: 3484..4383

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D7Q1_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 61.5
  • Coverage: 252.0
  • Bit_score: 311
  • Evalue 7.70e-82
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;" UNIPROT
DB: UniProtKB
  • Identity: 62.7
  • Coverage: 252.0
  • Bit_score: 314
  • Evalue 1.70e-82
RpoD family RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 53.0
  • Coverage: 283.0
  • Bit_score: 286
  • Evalue 7.50e-75

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

uncultured bacterium → Bacteria

Sequences

DNA sequence
Length: 900
ATGCCTCTTCTGTCCCCCGATCAAGAGACCGAACTCGGGCGGCGAATCCAAGACGGTGACGCGGCAGCGCGCGAGCGGATGATCAACGCAAACCTGCGGCTCGTTGTAACCATCGCACGCGATTACATCAATCTCGGTCTGCCCCTGGTTGACCTGATTTCGGAAGGAAACATCGGATTAATGGAAGCAGTCGATCGATTCGACCCGGAAAAAGGCGTCAAGCTAAGCACCTATGCGATTTGGTGGATCAAGCGGGCGATCAAAAACGCACTTGCCAATCAGAGCAAAACGATCCGATTGCCGGCGAAAACGATCGAGAAAATTAGTAGAATGCGTCGCGTTTCAGCGCAAATGGGCAACGAGCTCGGTCGCGAACCGACTGAGGGCGAACTCGGTGAAGAGCTGGGGATTGCCACTGAAAAAGTGGCGCGACTGAGAAGTATTGGCCTGCGTCCCGAATCGCTTGACGCGCCTGTTGGCGACGATGAAGCGACCGAACTTGGCGAAAAAGTTCCAGATGAACAAGCGCAAACTCCTTTCGAATCACTGCGCGAGAAGGATTTCTCGGACCAGATCAATCGGGTTCTCAAAAACCTCAACAAACGCGACGCAACGATCATCGCAGAGCGTTTCGGGCTAAACGGCACGACAGCAAAACCGCTTGAACAGGTTGCCGAGATAGTCGGGGTAACGCGCGAACGCGTTCGGCAGTTGGAACTAATCGCACTCGCGAAATTGCGTCGCGCCTTCAAGAAGCATCTCGGCGCTCTGGAATCCCAGTCTACCGAGGCTCTTGCTGCGAAATCATCGACTGTGCTCGGATTTGTGCTAGAACGAACCAGCCAGGGTGGCGAAATTGGCAGACGCGCCAGACTTAGGATCTGGTGGAGAAATCCTTAG
PROTEIN sequence
Length: 300
MPLLSPDQETELGRRIQDGDAAARERMINANLRLVVTIARDYINLGLPLVDLISEGNIGLMEAVDRFDPEKGVKLSTYAIWWIKRAIKNALANQSKTIRLPAKTIEKISRMRRVSAQMGNELGREPTEGELGEELGIATEKVARLRSIGLRPESLDAPVGDDEATELGEKVPDEQAQTPFESLREKDFSDQINRVLKNLNKRDATIIAERFGLNGTTAKPLEQVAEIVGVTRERVRQLELIALAKLRRAFKKHLGALESQSTEALAAKSSTVLGFVLERTSQGGEIGRRARLRIWWRNP*