ggKbase home page

13_1_20cm_4_scaffold_854_8

Organism: 13_1_20CM_4_Verrucomicrobia_54_11

near complete RP 42 / 55 MC: 3 BSCG 44 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: comp(6497..7039)

Top 3 Functional Annotations

Value Algorithm Source
Cupin 2 conserved barrel domain protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PR35_CHIPD similarity UNIREF
DB: UNIREF100
  • Identity: 60.8
  • Coverage: 166.0
  • Bit_score: 214
  • Evalue 7.70e-53
Cupin 2 conserved barrel domain protein {ECO:0000313|EMBL:ACU62588.1}; Flags: Precursor;; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitino UNIPROT
DB: UniProtKB
  • Identity: 60.8
  • Coverage: 166.0
  • Bit_score: 214
  • Evalue 1.10e-52
cupin similarity KEGG
DB: KEGG
  • Identity: 60.8
  • Coverage: 166.0
  • Bit_score: 214
  • Evalue 2.20e-53

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Chitinophaga pinensis → Chitinophaga → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 543
ATGACTCAAAAGCACGATCTTGTTCAGCCCGAGCAATTGAATTTCAAAGACGACGGTATTTTCCCAAATAGTCCCCTTTCTTTGCTGTTTTATCGGCAGGCAATCGCAACCGATGCCAAAGATTCGGCGTCCATTTTCGAACAGCGTTTTGCCGAAAACGATTGGACCAACTCGTGGCGAGACGGAGTCTATTCCTTTCCCCATTATCACAGCACGTCGCATGAAGTGCTCGGTGTTTATTCTGGCGCTGCCACTCTGCGACTCGGCGGCGAGCATGGCAAGAACATCGAGGTGCATGCGGGCGATGTGATAGTCATCCCGGCCGGTGTGGCACATCAGAACATCGGTGCTAGCAACGATTTTGGCGTCGTAGGAGCTTATCCCGAAGGTCGCCAGTGGGATTTACTTCGGGGTCTCCCGGGTGAGCGCCCGAAAGCCGATCACAATATTGCGGCCTTGCCAATGCCGGAGAACGATCCGATTTACGGAGTCGAAGGCCCATTACGACGGATTTGGAAATCCAACGACGCAAAATCGAAATAA
PROTEIN sequence
Length: 181
MTQKHDLVQPEQLNFKDDGIFPNSPLSLLFYRQAIATDAKDSASIFEQRFAENDWTNSWRDGVYSFPHYHSTSHEVLGVYSGAATLRLGGEHGKNIEVHAGDVIVIPAGVAHQNIGASNDFGVVGAYPEGRQWDLLRGLPGERPKADHNIAALPMPENDPIYGVEGPLRRIWKSNDAKSK*