ggKbase home page

13_1_20cm_4_scaffold_981_8

Organism: 13_1_20CM_4_Chloroflexi_53_11

partial RP 36 / 55 MC: 1 BSCG 36 / 51 MC: 1 ASCG 10 / 38 MC: 2
Location: comp(4908..5831)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6U1G8_9CHLR similarity UNIREF
DB: UNIREF100
  • Identity: 66.1
  • Coverage: 289.0
  • Bit_score: 382
  • Evalue 4.80e-103
  • rbh
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:EFH82612.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" sou UNIPROT
DB: UniProtKB
  • Identity: 66.1
  • Coverage: 289.0
  • Bit_score: 382
  • Evalue 6.70e-103
ECF subfamily RNA polymerase sigma-24 factor similarity KEGG
DB: KEGG
  • Identity: 57.1
  • Coverage: 282.0
  • Bit_score: 307
  • Evalue 5.50e-81

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Ktedonobacter racemifer → Ktedonobacter → Ktedonobacterales → Ktedonobacteria → Chloroflexi → Bacteria

Sequences

DNA sequence
Length: 924
ATGATAAAGAACAGGGAAGATGTGCCAGGGATAAAGCATCACGTGAAGAATCCAGAAAATACAACGCAGATCTTCAACCAGTACCGGGCGCTGCTCTTTTCTATTGCCTATCGTATGCTGTGCAACGCCACGGATGCCGAGGATATTGTGCAGGAGGCCTTTGTGCGCTGGCTGCAGGCCAGTGATGGAGAGATCCAATCGCCCAAAGCCTTCCTTTCGACGGTAGTCACGCGCCTGTGTATCGACCAGTTGCGTTCGGCGAGGGCGCGGCGCGAACTCTACGTTGGCCCCTGGCTGCCCGAGCCTCTCCCAACGGACCAGCGGCAAGATCTGACCGAGACGGCCATTCTGGGCGAGTCGCTCTCCTTCGCCTTTCTGGTGATGCTGGAAAGCCTCGGGCCGCTTGAGCGCGCCGTCTTCTTGCTGCGCGAAGTCTTCGATTACGACTATGCCGAGATCGCGGCCATCGTGGGCAAAAGCGAGGCGTACTGCCGGCAGGTGCTGCATCGCGCACACCAGCACCTTGAGCAGCGCCGCCCGCGTTTCGAGGTCTCTCGCCAGCAGCAGGAACGCATTACCTCCCAGTTCCTGGATGTCAGCCTCGGTGGTGATATGCAAGGCCTGTTGAACCTGCTGGCAGATGATGTCGTTTTTGTCGCGGACAGCGGTGGCAAGGCCTGGGGCGGCCCCAAACCCGTTCATGGAGCCGATAACGTGGCTCGCGGTGTGCTTGGTGGTCGCCGCTTCCTGCCGCCTGGCATACAGGGCGGCATCGAAGAGGTCAACGGGCAGCCAGCCATCGTGGGATACGACGATGGCCGCCCTGTCATTGTCTTGCTCCTGGATATTGAAGGAGAGCGCATTCGCAACATCTACCAGGTTACGAACCCCGACAAGCTGCACGGCATCAGGACTGGCAACTGA
PROTEIN sequence
Length: 308
MIKNREDVPGIKHHVKNPENTTQIFNQYRALLFSIAYRMLCNATDAEDIVQEAFVRWLQASDGEIQSPKAFLSTVVTRLCIDQLRSARARRELYVGPWLPEPLPTDQRQDLTETAILGESLSFAFLVMLESLGPLERAVFLLREVFDYDYAEIAAIVGKSEAYCRQVLHRAHQHLEQRRPRFEVSRQQQERITSQFLDVSLGGDMQGLLNLLADDVVFVADSGGKAWGGPKPVHGADNVARGVLGGRRFLPPGIQGGIEEVNGQPAIVGYDDGRPVIVLLLDIEGERIRNIYQVTNPDKLHGIRTGN*